A metagenomic survey of forest soil microbial communities more than a decade after timber harvesting

被引:8
|
作者
Wilhelm, Roland C. [1 ]
Cardenas, Erick [1 ]
Leung, Hilary [1 ]
Maas, Kendra [1 ]
Hartmann, Martin [2 ]
Hahn, Aria [1 ]
Hallam, Steven [1 ]
Mohn, William W. [1 ,3 ]
机构
[1] Univ British Columbia, Inst Life Sci, Dept Microbiol & Immunol, Vancouver, BC V6T 1Z3, Canada
[2] Swiss Fed Inst Forest Snow & Landscape Res, CH-8903 Birmensdorf, Switzerland
[3] Univ British Columbia, Inst Life Sci, Dept Microbiol & Immunol, 2350 Hlth Sci Mall, Vancouver, BC V6T 1Z1, Canada
基金
加拿大自然科学与工程研究理事会;
关键词
VEGETATION CONTROL; BIOMASS; PRODUCTIVITY; COMPACTION; REMOVAL; MATTER;
D O I
10.1038/sdata.2017.92
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The scarcity of long-term data on soil microbial communities in the decades following timber harvesting limits current understanding of the ecological problems associated with maintaining the productivity of managed forests. The high complexity of soil communities and the heterogeneity of forest and soil necessitates a comprehensive approach to understand the role of microbial processes in managed forest ecosystems. Here, we describe a curated collection of well replicated, multi-faceted data from eighteen reforested sites in six different North American ecozones within the Long-term Soil Productivity (LTSP) Study, without detailed analysis of results or discussion. The experiments were designed to contrast microbial community composition and function among forest soils from harvested treatment plots with varying intensities of organic matter removal. The collection includes 724 bacterial (16S) and 658 fungal (ITS2) amplicon libraries, 133 shotgun metagenomic libraries as well as stable isotope probing amplicon libraries capturing the effects of harvesting on hemicellulolytic and cellulolytic populations. This collection serves as a foundation for the LTSP Study and other studies of the ecology of forest soil and forest disturbance.
引用
收藏
页数:8
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