Selection of reference genes for RT-qPCR studies in blood of beluga whales (Delphinapterus leucas)

被引:10
|
作者
Chen, I-Hua [1 ]
Wang, Jiann-Hsiung [1 ]
Chou, Shih-Jen [1 ]
Wu, Yeong-Huey [2 ]
Li, Tsung-Hsien [3 ]
Leu, Ming-Yih [3 ,4 ]
Chang, Wen-Been [3 ]
Yang, Wei Cheng [1 ]
机构
[1] Natl Chiayi Univ, Dept Vet Med, Chiayi 60004, Taiwan
[2] Natl Pingtung Univ Sci & Technol, Dept Vet Med, Pingtung 91201, Taiwan
[3] Natl Museum Marine Biol & Aquarium, Dept Biol, Pingtung, Taiwan
[4] Natl Dong Hwa Univ, Grad Inst Marine Biol, Pingtung, Taiwan
来源
PEERJ | 2016年 / 4卷
关键词
Beluga; Housekeeping; Quantitative PCR; Gene expression; REAL-TIME PCR; DOLPHINS TURSIOPS-TRUNCATUS; PORPOISES PHOCOENA-PHOCOENA; MESSENGER-RNA EXPRESSION; HOUSEKEEPING GENES; NORMALIZATION; CETACEANS; STRESS; IMMUNE;
D O I
10.7717/peerj.1810
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Reverse transcription quantitative PCR (RT-qPCR) is used for research in gene expression, and it is vital to choose appropriate housekeeping genes (HKGs) as reference genes to obtain correct results. The purpose of this study is to determine stably expressed HKGs in blood of beluga whales (Delphinapterus leucas) that can be the appropriate reference genes in relative quantification in gene expression research. Sixty blood samples were taken from four beluga whales. Thirteen candidate HKGs (ACTS, B2M, GAPDH, HPRT1, LDHB, PGK1, RPL4, RPL8, RPL18, RPS9, RPS18, TFRC, YVVHAZ) were tested using RT-qPCR. The stability values of the HKGs were determined by four different algorithms. Comprehensive analysis of the results revealed that RPL4, PGK1 and ACTB fare strongly recommended for use in future RT-qPCR studies in beluga blood samples. This research provides recomniendation of reference gene selection, which may contribute to further mRNA relative quantification research in the peripheral mood leukocytes in captive cetaceans. The gene expression assessment of the immune components in blood have the potential to serve as an important approach to evaluating cetacean health influenced by environmental insults.
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页数:14
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