Toward increased concentration sensitivity for continuous wave EPR investigations of spin-labeled biological macromolecules at high fields

被引:23
|
作者
Song, Likai [1 ]
Liu, Zhanglong [3 ]
Kaur, Pavanjeet [1 ,2 ]
Esquiaqui, Jackie M. [3 ]
Hunter, Robert I. [4 ]
Hill, Stephen [1 ,2 ]
Smith, Graham M. [4 ]
Fanucci, Gail E. [3 ]
机构
[1] Florida State Univ, Natl High Magnet Field Lab, Tallahassee, FL USA
[2] Florida State Univ, Dept Phys, Tallahassee, FL 32306 USA
[3] Univ Florida, Dept Chem, POB 117200, Gainesville, FL 32611 USA
[4] Univ St Andrews, Sch Phys & Astron, St Andrews KY16 9SS, Fife, Scotland
基金
美国国家卫生研究院; 美国国家科学基金会; 英国工程与自然科学研究理事会;
关键词
EPR; High field; Spin label; IDP; RNA; C-TERMINAL DOMAIN; INTRINSICALLY DISORDERED PROTEIN; LEADER-LINKER INTERACTION; CONFORMATIONAL-CHANGES; UNSTRUCTURED PROTEINS; DISTANCE MEASUREMENTS; VIRUS NUCLEOPROTEIN; ASPARTIC PROTEINASE; LIGAND-BINDING; LIPID-BILAYERS;
D O I
10.1016/j.jmr.2016.02.007
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
High-field, high-frequency electron paramagnetic resonance (EPR) spectroscopy at W-(similar to 94 GHz) and D-band (similar to 140 GHz) is important for investigating the conformational dynamics of flexible biological macromolecules because this frequency range has increased spectral sensitivity to nitroxide motion over the 100 ps to 2 ns regime. However, low concentration sensitivity remains a roadblock for studying aqueous samples at high magnetic fields. Here, we examine the sensitivity of a non-resonant thin-layer cylindrical sample holder, coupled to a quasi-optical induction-mode W-band EPR spectrometer (HiPER), for continuous wave (CW) EPR analyses of: (i) the aqueous nitroxide standard, TEMPO; (ii) the unstructured to alpha-helical transition of a model IDP protein; and (iii) the base-stacking transition in a kink-turn motif of a large 232 nt RNA. For sample volumes of similar to 50 mu L, concentration sensitivities of 2-20 mu M were achieved, representing a similar to 10-fold enhancement compared to a cylindrical TE011 resonator on a commercial Bruker W-band spectrometer. These results therefore highlight the sensitivity of the thin-layer sample holders employed in HiPER for Spin-labeling studies of biological macromolecules at high fields, where applications can extend to other systems that are facilitated by the modest sample volumes and ease of sample loading and geometry. (C) 2016 Elsevier Inc. All rights reserved.
引用
收藏
页码:188 / 196
页数:9
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