Syndromic surveillance;
MEWMA;
MCUSUM;
Time series;
Directional multivariate control charts;
Epidemic simulation;
MULTIPLE DATA STREAMS;
CONTROL CHARTS;
HEALTH DATA;
SWITZERLAND;
ERADICATION;
SYSTEM;
D O I:
10.1016/j.prevetmed.2019.104778
中图分类号:
S85 [动物医学(兽医学)];
学科分类号:
0906 ;
摘要:
Multivariate Syndromic Surveillance (SyS) systems that simultaneously assess and combine information from different data sources are especially useful for strengthening surveillance systems for early detection of infectious disease epidemics. Despite the strong motivation for implementing multivariate SyS and there being numerous methods reported, the number of operational multivariate SyS systems in veterinary medicine is still very small. One possible reason is that assessing the performance of such surveillance systems remains challenging because field epidemic data are often unavailable. The objective of this study is to demonstrate a practical multivariate event detection method (directionally sensitive multivariate control charts) that can be easily applied in livestock disease SyS, using syndrome time series data from the Swiss cattle population as an example. We present a standardized method for simulating multivariate epidemics of different diseases using four diseases as examples: Bovine Virus Diarrhea (BVD), Infectious Bovine Rhinotracheitis (IBR), Bluetongue virus (BTV) and Schmallenberg virus (SV). Two directional multivariate control chart algorithms, Multivariate Exponentially Weighted Moving Average (MEWMA) and Multivariate Cumulative Sum (MCUSUM) were compared. The two algorithms were evaluated using 12 syndrome time series extracted from two Swiss national databases. The two algorithms were able to detect all simulated epidemics around 4.5 months after the start of the epidemic, with a specificity of 95%. However, the results varied depending on the algorithm and the disease. The MEWMA algorithm always detected epidemics earlier than the MCUSUM, and epidemics of IBR and SV were detected earlier than epidemics of BVD and BTV. Our results show that the two directional multivariate control charts are promising methods for combining information from multiple time series for early detection of subtle changes in time series from a population without producing an unreasonable amount of false alarms. The approach that we used for simulating multivariate epidemics is relatively easy to implement and could be used in other situations where real epidemic data are unavailable. We believe that our study results can support the implementation and assessment of multivariate SyS systems in animal health.
机构:
Fdn Tour Valat, Ctr Rech Conservat Zones Humides Mediterraneennes, Arles, France
Aix Marseille Univ, UFR Sci, Marseille, FranceVetagroSup, INRA Anim Epidemiol UR0346, F-69280 Marcy Letoile, France
Sandoz, Alain
Kutasi, Orsolya
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机构:
Szent Istvan Univ MTA SZIE, Hungarian Acad Sci, Large Anim Clin Res Grp, Ullo, Dora Major, HungaryVetagroSup, INRA Anim Epidemiol UR0346, F-69280 Marcy Letoile, France
Kutasi, Orsolya
Sala, Carole
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机构:
ANSES Lyon, Epidemiol Unit, Lyon, FranceVetagroSup, INRA Anim Epidemiol UR0346, F-69280 Marcy Letoile, France
Sala, Carole
Leblond, Agnes
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机构:
VetagroSup, INRA Anim Epidemiol UR0346, F-69280 Marcy Letoile, France
VetAgroSup, Dept Hipp, Marcy Letoile, France
RESPE, Caen, FranceVetagroSup, INRA Anim Epidemiol UR0346, F-69280 Marcy Letoile, France
机构:
Univ Prince Edward Isl, Atlantic Vet Coll, Dept Hlth Management, Charlottetown, PE C1A 4P3, CanadaUniv Prince Edward Isl, Atlantic Vet Coll, Dept Hlth Management, Charlottetown, PE C1A 4P3, Canada
Dorea, Fernanda C.
McEwen, Beverly J.
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机构:
Univ Guelph, Ontario Vet Coll, Hlth Anim Lab, Guelph, ON N1H 6R8, CanadaUniv Prince Edward Isl, Atlantic Vet Coll, Dept Hlth Management, Charlottetown, PE C1A 4P3, Canada
McEwen, Beverly J.
McNab, W. Bruce
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机构:
Ontario Minist Agr Food & Rural Affairs, Guelph, ON N1G 4Y2, CanadaUniv Prince Edward Isl, Atlantic Vet Coll, Dept Hlth Management, Charlottetown, PE C1A 4P3, Canada
McNab, W. Bruce
Revie, Crawford W.
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Univ Prince Edward Isl, Atlantic Vet Coll, Dept Hlth Management, Charlottetown, PE C1A 4P3, CanadaUniv Prince Edward Isl, Atlantic Vet Coll, Dept Hlth Management, Charlottetown, PE C1A 4P3, Canada
Revie, Crawford W.
Sanchez, Javier
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机构:
Univ Prince Edward Isl, Atlantic Vet Coll, Dept Hlth Management, Charlottetown, PE C1A 4P3, CanadaUniv Prince Edward Isl, Atlantic Vet Coll, Dept Hlth Management, Charlottetown, PE C1A 4P3, Canada