The cold denatured state is compact but expands at low temperatures: Hydrodynamic properties of the cold denatured state of the C-terminal domain of L9
被引:38
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作者:
Li, Ying
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机构:SUNY Stony Brook, Dept Chem, Stony Brook, NY 11794 USA
Li, Ying
Shan, Bing
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h-index: 0
机构:SUNY Stony Brook, Dept Chem, Stony Brook, NY 11794 USA
Shan, Bing
Raleigh, Daniel P.
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h-index: 0
机构:
SUNY Stony Brook, Dept Chem, Stony Brook, NY 11794 USASUNY Stony Brook, Dept Chem, Stony Brook, NY 11794 USA
Raleigh, Daniel P.
[1
]
机构:
[1] SUNY Stony Brook, Dept Chem, Stony Brook, NY 11794 USA
[2] SUNY Stony Brook, Grad Program Biochem & Struct Biol, Stony Brook, NY 11794 USA
[3] SUNY Stony Brook, Grad Program Biophys, Stony Brook, NY 11794 USA
cold denaturation;
denatured state;
L9;
hydrodynamic radius;
protein unfolding;
D O I:
10.1016/j.jmb.2007.02.011
中图分类号:
Q5 [生物化学];
Q7 [分子生物学];
学科分类号:
071010 ;
081704 ;
摘要:
A point mutation of a small globular protein, the C-terminal domain of L9 destabilizes the protein and leads to observable cold-denaturation at temperatures above zero. The cold denatured state is in slow exchange with the native state on the NMR time scale, and this allows the hydrodynamic properties of the cold unfolded state and the native state to be measured under identical conditions using pulsed-field gradient NMR diffusion measurements. This provides the first experimental measurement of the hydrodynamic properties of a cold unfolded protein and its folded form under identical conditions. Hydrodynamic radii of the cold-induced unfolded states were measured for a set of temperatures ranging from 2 degrees C to 25 degrees C at pD 6.6 in the absence of denaturant. The cold unfolded state is compact compared to the urea or acid unfolded state and a trend of increasing radii of hydration is observed as the temperature is lowered. These observations are confirmed by experiments on the same protein at pD 8.0, where it is more stable, in the presence of a modest concentration of urea. The expansion of the cold-denatured state at lower temperatures is consistent with the temperature dependence of hydrophobic interactions. (c) 2007 Published by Elsevier Ltd.
机构:
SUNY Stony Brook, Dept Chem, Stony Brook, NY 11794 USASUNY Stony Brook, Dept Chem, Stony Brook, NY 11794 USA
Shan, Bing
McClendon, Sebastian
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机构:
Weill Cornell Med Coll, Dept Biochem, New York, NY 10065 USA
Weill Cornell Med Coll, Program Struct Biol, New York, NY 10065 USASUNY Stony Brook, Dept Chem, Stony Brook, NY 11794 USA
McClendon, Sebastian
Rospigliosi, Carla
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机构:
Weill Cornell Med Coll, Dept Biochem, New York, NY 10065 USA
Weill Cornell Med Coll, Program Struct Biol, New York, NY 10065 USASUNY Stony Brook, Dept Chem, Stony Brook, NY 11794 USA
Rospigliosi, Carla
Eliezer, David
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机构:
Weill Cornell Med Coll, Dept Biochem, New York, NY 10065 USA
Weill Cornell Med Coll, Program Struct Biol, New York, NY 10065 USASUNY Stony Brook, Dept Chem, Stony Brook, NY 11794 USA
Eliezer, David
Raleighr, Daniel P.
论文数: 0引用数: 0
h-index: 0
机构:
SUNY Stony Brook, Dept Chem, Stony Brook, NY 11794 USA
SUNY Stony Brook, Grad Program Biochem & Struct Biol, Stony Brook, NY 11794 USA
SUNY Stony Brook, Grad Program Biophys, Stony Brook, NY 11794 USASUNY Stony Brook, Dept Chem, Stony Brook, NY 11794 USA
机构:
SUNY Stony Brook, Grad Program Biochem & Struct Biol, Stony Brook, NY 11794 USASUNY Stony Brook, Grad Program Biochem & Struct Biol, Stony Brook, NY 11794 USA
Stenzoski, Natalie E.
Luang, Bowu
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SUNY Stony Brook, Dept Chem, Stony Brook, NY 11794 USASUNY Stony Brook, Grad Program Biochem & Struct Biol, Stony Brook, NY 11794 USA
Luang, Bowu
Holehouse, Alex S.
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机构:
Washington Univ, Ctr Biol Syst Engn, Dept Biomed Engn, St Louis, MO USASUNY Stony Brook, Grad Program Biochem & Struct Biol, Stony Brook, NY 11794 USA
Holehouse, Alex S.
Raleigh, Daniel P.
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机构:
SUNY Stony Brook, Grad Program Biochem & Struct Biol, Stony Brook, NY 11794 USA
SUNY Stony Brook, Dept Chem, Stony Brook, NY 11794 USA
UCL, Inst Struct & Mol Biol, London, EnglandSUNY Stony Brook, Grad Program Biochem & Struct Biol, Stony Brook, NY 11794 USA
机构:
Fdn Cenci Bolognetti, Ist Pasteur, Rome, Italy
Univ Roma La Sapienza, Ist Biol & Patol Mol, CNR, Dipartimento Sci Biochim A Rossi Fanelli, Rome, ItalyFdn Cenci Bolognetti, Ist Pasteur, Rome, Italy
Scaloni, Flavio
Federici, Luca
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机构:
Univ G dAnnunzio, Ctr Studi SullInvecchiamento, Chieti, Italy
Univ G dAnnunzio, Dipartimento Sci Biomed, Chieti, ItalyFdn Cenci Bolognetti, Ist Pasteur, Rome, Italy
Federici, Luca
Brunori, Maurizio
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Fdn Cenci Bolognetti, Ist Pasteur, Rome, Italy
Univ Roma La Sapienza, Ist Biol & Patol Mol, CNR, Dipartimento Sci Biochim A Rossi Fanelli, Rome, ItalyFdn Cenci Bolognetti, Ist Pasteur, Rome, Italy
Brunori, Maurizio
Gianni, Stefano
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机构:
Fdn Cenci Bolognetti, Ist Pasteur, Rome, Italy
Univ Roma La Sapienza, Ist Biol & Patol Mol, CNR, Dipartimento Sci Biochim A Rossi Fanelli, Rome, ItalyFdn Cenci Bolognetti, Ist Pasteur, Rome, Italy
机构:
SUNY Stony Brook, Dept Chem, Stony Brook, NY 11794 USASUNY Stony Brook, Dept Chem, Stony Brook, NY 11794 USA
Luan, Bowu
Shan, Bing
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SUNY Stony Brook, Dept Chem, Stony Brook, NY 11794 USASUNY Stony Brook, Dept Chem, Stony Brook, NY 11794 USA
Shan, Bing
Baiz, Carlos
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机构:
MIT, Dept Chem, Cambridge, MA 02139 USASUNY Stony Brook, Dept Chem, Stony Brook, NY 11794 USA
Baiz, Carlos
Tokmakoff, Andrei
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MIT, Dept Chem, Cambridge, MA 02139 USASUNY Stony Brook, Dept Chem, Stony Brook, NY 11794 USA
Tokmakoff, Andrei
Raleigh, Daniel P.
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h-index: 0
机构:
SUNY Stony Brook, Dept Chem, Stony Brook, NY 11794 USA
SUNY Stony Brook, Grad Program Biochem & Struct Biol, Stony Brook, NY 11794 USA
SUNY Stony Brook, Grad Program Biophys, Stony Brook, NY 11794 USASUNY Stony Brook, Dept Chem, Stony Brook, NY 11794 USA
机构:
SUNY Stony Brook, Dept Chem, Stony Brook, NY 11794 USASUNY Stony Brook, Dept Chem, Stony Brook, NY 11794 USA
Meng, Wenli
Raleigh, Daniel P.
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h-index: 0
机构:
SUNY Stony Brook, Dept Chem, Stony Brook, NY 11794 USA
SUNY Stony Brook, Grad Program Biochem & Struct Biol, Stony Brook, NY 11794 USA
SUNY Stony Brook, Grad Program Biophys, Stony Brook, NY 11794 USASUNY Stony Brook, Dept Chem, Stony Brook, NY 11794 USA
机构:
Univ Roma La Sapienza, CNR, Dipartimento Sci Biochim A Rossi Fanelli, Ist Biol & Patol Mol, I-00185 Rome, Italy
Univ Roma La Sapienza, Ist Pasteur, Fdn Cenci Bolognetti, I-00185 Rome, ItalyUniv Roma La Sapienza, CNR, Dipartimento Sci Biochim A Rossi Fanelli, Ist Biol & Patol Mol, I-00185 Rome, Italy
Scaloni, Flavio
Gianni, Stefano
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Univ Roma La Sapienza, CNR, Dipartimento Sci Biochim A Rossi Fanelli, Ist Biol & Patol Mol, I-00185 Rome, Italy
Univ Roma La Sapienza, Ist Pasteur, Fdn Cenci Bolognetti, I-00185 Rome, ItalyUniv Roma La Sapienza, CNR, Dipartimento Sci Biochim A Rossi Fanelli, Ist Biol & Patol Mol, I-00185 Rome, Italy
Gianni, Stefano
Federici, Luca
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机构:
Univ G dAnnunzio, Ctr Studi Invecchiamento, Chieti, Italy
Univ G dAnnunzio, Dipartimento Sci Biomed, Chieti, ItalyUniv Roma La Sapienza, CNR, Dipartimento Sci Biochim A Rossi Fanelli, Ist Biol & Patol Mol, I-00185 Rome, Italy
Federici, Luca
Falini, Brunangelo
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Univ Perugia, Sez Ematol & Immunol, Dipartimento Med Clin & Sperimentale, I-06100 Perugia, ItalyUniv Roma La Sapienza, CNR, Dipartimento Sci Biochim A Rossi Fanelli, Ist Biol & Patol Mol, I-00185 Rome, Italy
Falini, Brunangelo
Brunori, Maurizio
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Univ Roma La Sapienza, CNR, Dipartimento Sci Biochim A Rossi Fanelli, Ist Biol & Patol Mol, I-00185 Rome, Italy
Univ Roma La Sapienza, Ist Pasteur, Fdn Cenci Bolognetti, I-00185 Rome, ItalyUniv Roma La Sapienza, CNR, Dipartimento Sci Biochim A Rossi Fanelli, Ist Biol & Patol Mol, I-00185 Rome, Italy
机构:
Univ Roma La Sapienza, Ist Pasteur, Fdn Cenci Bolognetti, Rome, Italy
Univ Roma La Sapienza, Dipartimento Sci Biochim A Rossi Fanelli, CNR, Ist Biol & Patol Mol, Rome, ItalyUniv Roma La Sapienza, Ist Pasteur, Fdn Cenci Bolognetti, Rome, Italy
Chiarella, Sara
Federici, Luca
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h-index: 0
机构:
Univ G dAnnunzio, Ce SI Ctr Sci Invecchiamento, Chieti, Italy
Univ G dAnnunzio, Dipartimento Sci Sperimentali & Clin, Chieti, ItalyUniv Roma La Sapienza, Ist Pasteur, Fdn Cenci Bolognetti, Rome, Italy
Federici, Luca
Di Matteo, Adele
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h-index: 0
机构:
Univ Roma La Sapienza, Ist Pasteur, Fdn Cenci Bolognetti, Rome, Italy
Univ Roma La Sapienza, Dipartimento Sci Biochim A Rossi Fanelli, CNR, Ist Biol & Patol Mol, Rome, ItalyUniv Roma La Sapienza, Ist Pasteur, Fdn Cenci Bolognetti, Rome, Italy
Di Matteo, Adele
Brunori, Maurizio
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机构:
Univ Roma La Sapienza, Ist Pasteur, Fdn Cenci Bolognetti, Rome, Italy
Univ Roma La Sapienza, Dipartimento Sci Biochim A Rossi Fanelli, CNR, Ist Biol & Patol Mol, Rome, ItalyUniv Roma La Sapienza, Ist Pasteur, Fdn Cenci Bolognetti, Rome, Italy
Brunori, Maurizio
Gianni, Stefano
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Univ Roma La Sapienza, Ist Pasteur, Fdn Cenci Bolognetti, Rome, Italy
Univ Roma La Sapienza, Dipartimento Sci Biochim A Rossi Fanelli, CNR, Ist Biol & Patol Mol, Rome, ItalyUniv Roma La Sapienza, Ist Pasteur, Fdn Cenci Bolognetti, Rome, Italy
机构:
SUNY Stony Brook, Dept Chem, Stony Brook, NY 11794 USAWeill Cornell Med Coll, Dept Biochem, New York, NY 10032 USA
Shan, Bing
Bhattacharya, Shibani
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h-index: 0
机构:
New York Struct Biol Ctr, New York, NY 10027 USAWeill Cornell Med Coll, Dept Biochem, New York, NY 10032 USA
Bhattacharya, Shibani
Eliezer, David
论文数: 0引用数: 0
h-index: 0
机构:
Weill Cornell Med Coll, Dept Biochem, New York, NY 10032 USA
Weill Cornell Med Coll, Program Struct Biol, New York, NY 10032 USAWeill Cornell Med Coll, Dept Biochem, New York, NY 10032 USA
Eliezer, David
Raleigh, Daniel P.
论文数: 0引用数: 0
h-index: 0
机构:
SUNY Stony Brook, Dept Chem, Stony Brook, NY 11794 USA
SUNY Stony Brook, Grad Program Biochem & Struct Biol, Stony Brook, NY 11794 USA
SUNY Stony Brook, Grad Program Biophys, Stony Brook, NY 11794 USAWeill Cornell Med Coll, Dept Biochem, New York, NY 10032 USA
机构:
SUNY Stony Brook, Dept Chem, Stony Brook, NY 11794 USASUNY Stony Brook, Dept Chem, Stony Brook, NY 11794 USA
Shan, Bing
Eliezer, David
论文数: 0引用数: 0
h-index: 0
机构:
Weill Cornell Med Coll, Dept Biochem, New York, NY 10065 USA
Weill Cornell Med Coll, Program Struct Biol, New York, NY 10065 USASUNY Stony Brook, Dept Chem, Stony Brook, NY 11794 USA
Eliezer, David
Raleigh, Daniel P.
论文数: 0引用数: 0
h-index: 0
机构:
SUNY Stony Brook, Dept Chem, Stony Brook, NY 11794 USA
SUNY Stony Brook, Grad Program Biochem & Struct Biol, Stony Brook, NY 11794 USA
SUNY Stony Brook, Grad Program Biophys, Stony Brook, NY 11794 USASUNY Stony Brook, Dept Chem, Stony Brook, NY 11794 USA