Sequence Variation in Toxoplasma gondii rop17 Gene among Strains from Different Hosts and Geographical Locations

被引:5
|
作者
Zhang, Nian-Zhang [1 ]
Xu, Ying [1 ,2 ]
Huang, Si-Yang [1 ]
Zhou, Dong-Hui [1 ]
Wang, Rui-Ai [1 ,3 ]
Zhu, Xing-Quan [1 ]
机构
[1] Chinese Acad Agr Sci, Lanzhou Vet Res Inst, Key Lab Vet Parasitol Gansu, State Key Lab Vet Etiol Biol, Lanzhou 730046, Gansu, Peoples R China
[2] Anhui Agr Univ, Coll Anim Sci & Technol, Hefei 230036, Anhui, Peoples R China
[3] South China Agr Univ, Coll Vet Med, Guangzhou 510642, Guangdong, Peoples R China
来源
基金
中国国家自然科学基金;
关键词
TOXOPLASMA-GONDII STRAINS; 1ST REPORT; IDENTIFICATION; KINASES; FAMILY;
D O I
10.1155/2014/349325
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Genetic diversity of T. gondii is a concern of many studies, due to the biological and epidemiological diversity of this parasite. The present study examined sequence variation in rhoptry protein 17 (ROP17) gene among T. gondii isolates from different hosts and geographical regions. The rop17 gene was amplified and sequenced from 10 T. gondii strains, and phylogenetic relationship among these T. gondii strains was reconstructed using maximum parsimony (MP), neighbor-joining (NJ), and maximum likelihood (ML) analyses. The partial rop17 gene sequences were 1375 bp in length and A+T contents varied from 49.45% to 50.11% among all examined T. gondii strains. Sequence analysis identified 33 variable nucleotide positions (2.1%), 16 of which were identified as transitions. Phylogeny reconstruction based on rop17 gene data revealed two major clusters which could readily distinguish Type I and Type II strains. Analyses of sequence variations in nucleotides and amino acids among these strains revealed high ratio of nonsynonymous to synonymous polymorphisms (>1), indicating that rop17 shows signs of positive selection. This study demonstrated the existence of slightly high sequence variability in the rop17 gene sequences among T. gondii strains from different hosts and geographical regions, suggesting that rop17 gene may represent a new genetic marker for population genetic studies of T. gondii isolates.
引用
收藏
页数:4
相关论文
共 35 条
  • [1] Sequence variation in the Toxoplasma gondii ROP20 gene among strains from different hosts and geographical locations
    Ning, H. R.
    Wang, J. L.
    Qin, S. Y.
    Huang, S. Y.
    Lou, Z. L.
    Hu, L. Y.
    Zhu, X. Q.
    [J]. GENETICS AND MOLECULAR RESEARCH, 2015, 14 (03): : 8414 - 8419
  • [2] Sequence Variation in ROP9 Gene among Toxoplasma gondii Strains from Different Hosts and Geographical Locations
    Chen, Jia
    Fang, Su-Fang
    Li, Zhong-Yuan
    Zhou, Dong-Hui
    Liu, Guo-Hua
    Zhu, Xing-Quan
    [J]. JOURNAL OF ANIMAL AND VETERINARY ADVANCES, 2012, 11 (22): : 4288 - 4291
  • [3] Sequence variation in the Toxoplasma gondii eIF4A gene among strains from different hosts and geographical locations
    Chen, J.
    Fang, S. F.
    Zhou, D. H.
    Li, Z. Y.
    Liu, G. H.
    Zhu, X. Q.
    [J]. GENETICS AND MOLECULAR RESEARCH, 2014, 13 (02) : 3356 - 3361
  • [4] Sequence variation in ROP8 gene among Toxoplasma gondii isolates from different hosts and geographical localities
    Li, Z. Y.
    Chen, J.
    Lu, J.
    Wang, C. R.
    Zhu, X. Q.
    [J]. GENETICS AND MOLECULAR RESEARCH, 2015, 14 (03): : 11403 - 11409
  • [5] Sequence variation in Toxoplasma gondii MIC13 gene among isolates from different hosts and geographical locations
    Ren, Di
    Zhou, Dong-Hui
    Xu, Min-Jun
    Zhou, Yang
    Yang, Jian-Fa
    Lin, Ze-Ping
    Lin, Rui-Qing
    Wu, Song-Ming
    Lin, Shao-Qi
    Zou, Feng-Cai
    Yuan, Zi-Guo
    [J]. AFRICAN JOURNAL OF MICROBIOLOGY RESEARCH, 2012, 6 (13): : 3265 - 3269
  • [6] Toxoplasma gondii rhoptry protein 38 gene: sequence variation among isolates from different hosts and geographical locations
    Xu, Y.
    Zhang, N. Z.
    Chen, J.
    Liu, G. H.
    Xu, Q. M.
    Zhou, D. H.
    Zhu, X. Q.
    [J]. GENETICS AND MOLECULAR RESEARCH, 2014, 13 (03): : 4839 - 4844
  • [7] Sequence Variation in Rhoptry Neck Protein 10 Gene among Toxoplasma gondii Isolates from Different Hosts and Geographical Locations
    Zhao, Yu
    Zhou, Donghui
    Chen, Jia
    Sun, Xiaolin
    [J]. IRANIAN JOURNAL OF PARASITOLOGY, 2017, 12 (03) : 332 - 338
  • [8] Sequence Variation in HSP40 Gene among 16 Toxoplasma gondii Isolates from Different Hosts and Geographical Locations
    Li, Zhong-Yuan
    Lu, Jing
    Zhou, Dong-Hui
    Chen, Jia
    Zhu, Xing-Quan
    [J]. BIOMED RESEARCH INTERNATIONAL, 2015, 2015
  • [9] Limited sequence variation in rhoptry protein 41 gene among Toxoplasma gondii isolates from different hosts and geographical locations
    Zhao, Y.
    Li, Z. Y.
    Zhou, D. H.
    Sun, X. L.
    [J]. TROPICAL BIOMEDICINE, 2016, 33 (02) : 370 - 374
  • [10] Sequence Diversity in MIC6 Gene among Toxoplasma gondii Isolates from Different Hosts and Geographical Locations
    Li, Zhong-Yuan
    Song, Hui-Qun
    Chen, Jia
    Zhu, Xing-Quan
    [J]. KOREAN JOURNAL OF PARASITOLOGY, 2015, 53 (03): : 341 - 344