Identification of Human Bone Remains by Autosomal STRs and Mitochondrial DNA SNPs

被引:2
|
作者
Amer, Sayed A. M. [1 ]
Al-Harthi, Hussam S. [2 ]
Refaat, Ahmed M. [2 ]
Bakdash, Abdulsallam [2 ]
Kassab, Ahmed Ch [2 ]
机构
[1] Taif Univ, Biol Dept, Fac Sci, PO 888, At Taif, Saudi Arabia
[2] Naif Arab Univ Secur Sci, Coll Forens Sci, Riyadh, Saudi Arabia
关键词
Degraded DNA; Human bones; mtDNA; SNPs; STRs; SKELETAL REMAINS; LENGTH HETEROPLASMY; MTDNA ANALYSIS; JAPANESE INDIVIDUALS; EXTRACTION METHODS; MISSING PERSONS; CONTROL REGION; ANCIENT DNA; SEQUENCE; TISSUES;
D O I
10.2485/jhtb.26.111
中图分类号
R318 [生物医学工程];
学科分类号
0831 ;
摘要
Advanced extraction and purification techniques were found to be essential tools for obtaining sufficient DNA from bones. However, in case of short tandem repeats (STRs) typing failure especially with old skeletal remains, mitochondrial DNA (mtDNA) analysis is the ultimate solution for individual and species identification. Thirty six bone samples were collected from human remains. DNA was extracted using the organic method after special sample preparations and quantified using a Real-time polymerase chain reaction (RT-PCR). Polymerase chain reaction (PCR) was done using Identifier Plus PCR Amplification Kit and amplified products were typed using a Genetic Analyzer for autosomal STR typing. Samples with DNA concentration above 0.04 ng were efficient in obtaining their complete STR profiles. MtDNA control region was also amplified and sequenced. MtDNA was more efficient than autosomal STR profiling in discriminating among human bone samples especially those which have low and/or degraded DNA content.
引用
收藏
页码:111 / 118
页数:8
相关论文
共 50 条
  • [1] Personal identification from human remains by mitochondrial DNA sequencing
    Koyama, H
    Iwasa, M
    Ohtani, S
    Ohira, H
    Tsuchimochi, T
    Maeno, Y
    Isobe, I
    Matsumoto, T
    Yamada, Y
    Nagao, M
    [J]. AMERICAN JOURNAL OF FORENSIC MEDICINE AND PATHOLOGY, 2002, 23 (03): : 272 - 276
  • [2] IDENTIFICATION OF HUMAN REMAINS BY AMPLIFICATION AND AUTOMATED SEQUENCING OF MITOCHONDRIAL-DNA
    SULLIVAN, KM
    HOPGOOD, R
    GILL, P
    [J]. INTERNATIONAL JOURNAL OF LEGAL MEDICINE, 1992, 105 (02) : 83 - 86
  • [3] STRs, mini STRs and SNPs - A comparative study for typing degraded DNA
    Senge, Tim
    Madea, Burkhard
    Junge, Anke
    Rothschild, Markus A.
    Schneider, Peter M.
    [J]. LEGAL MEDICINE, 2011, 13 (02): : 68 - 74
  • [4] Identification of human remains: Short tandem repeat analysis versus mitochondrial DNA
    Augustin, C
    Grossevollmer, E
    Puschel, K
    [J]. PROGRESS IN FORENSIC GENETICS 7, 1998, 1167 : 83 - 85
  • [5] Mitochondrial DNA sequence analysis of human remains
    Holland, MM
    Fisher, DL
    Roby, RK
    Ruderman, J
    Bryson, C
    Weedn, VW
    [J]. CRIME LABORATORY DIGEST, 1995, 22 (04): : 109 - 115
  • [6] Identification of remains by sequencing of mitochondrial DNA control region
    Seo, Y
    Uchiyama, T
    Shimizu, K
    Takahama, K
    [J]. AMERICAN JOURNAL OF FORENSIC MEDICINE AND PATHOLOGY, 2000, 21 (02): : 138 - 143
  • [7] Comparison of next generation sequencing (NGS) - (SNPs) and capillary electrophoresis (CE) - (STRs) in the genetic analysis of human remains
    Kokotas, Stavros
    Budowle, Bruce
    Papatheodorou, Athanasios
    Bolanaki, Eugenia
    Kondili, Aikaterini
    Metheniti, Aristea
    Vouropoulou, Maria
    Koukouvinos, Georgios
    Palaigeorgiou, Emmanouil
    Makras, Polyzois
    [J]. FORENSIC SCIENCE INTERNATIONAL-GENETICS, 2025, 74
  • [8] MITOCHONDRIAL-DNA SEQUENCE-ANALYSIS OF HUMAN SKELETAL REMAINS - IDENTIFICATION OF REMAINS FROM THE VIETNAM-WAR
    HOLLAND, MM
    FISHER, DL
    MITCHELL, LG
    RODRIGUEZ, WC
    CANIK, JJ
    MERRIL, CR
    WEEDN, VW
    [J]. JOURNAL OF FORENSIC SCIENCES, 1993, 38 (03) : 542 - 553
  • [9] An assessment of whether SNPs will replace STRs in national DNA databases
    Gill, P
    Werrett, DJ
    Budowle, B
    Guerrieri, R
    [J]. SCIENCE & JUSTICE, 2004, 44 (01) : 51 - 53
  • [10] An overview of autosomal STRs and identity SNPs in a Norwegian population using massively parallel sequencing
    Agudo, Maria Martin
    Aanes, Havard
    Albert, Michel
    Janssen, Kirstin
    Gill, Peter
    Bleka, Oyvind
    [J]. FORENSIC SCIENCE INTERNATIONAL-GENETICS, 2024, 71