Evidence of transoceanic dispersion of the genus Vanilla based on plastid DNA phylogenetic analysis

被引:40
|
作者
Bouetard, Anthony [1 ]
Lefeuvre, Pierre [1 ,2 ]
Gigant, Rodolphe [1 ,3 ]
Bory, Severine [1 ,3 ]
Pignal, Marc [4 ]
Besse, Pascale [3 ]
Grisoni, Michel [1 ]
机构
[1] Univ Reunion PVBMT, UMR Cirad 53, 7 Chemin IRAT, St Pierre 97410, Reunion, France
[2] Univ Cape Town, Inst Infect Dis & Mol Med, ZA-7925 Observatory, South Africa
[3] Univ Reunion PVBMT, UMR Cirad 53, St Denis 97715 9, Reunion, France
[4] Museum Natl Hist Nat, Dept Systemat & Evolut, UMR Origine Struct & Evolut Biodiversite 7205, F-75231 Paris 05, France
关键词
Orchidaceae; Vanilla; psaB; psbB; psbC; rbcL; Bayesian analysis; Phylogeography; Molecular dating; Gondwanan vicariance; Transoceanic dispersion; ORCHIDACEAE; SEQUENCES; AFRICA; DIVERSIFICATION; VANILLOIDEAE; PATTERNS; ORIGIN; NORTH; DISJUNCTIONS; BIOGEOGRAPHY;
D O I
10.1016/j.ympev.2010.01.021
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The phylogeny and the biogeographical history of the genus Vanilla was investigated using four chloroplastic genes (psbB, psbC; psaB and rbcL), on 47 accessions of Vanilla chosen from the ex situ CIRAD collection maintained in Reunion Island and additional sequences from GenBank. Bayesian methods provided a fairly well supported reconstruction of the phylogeny of the Vanilloideae sub-family and more particularly of the genus Vanilla. Three major phylogenetic groups in the genus Vanilla were differentiated, which is in disagreement with the actual classification in two sections (Foliosae and Aphyllae) based on morphological traits. Recent Bayesian relaxed molecular clock methods allowed to test the two main hypotheses of the phylogeography of the genus Vanilla. Early radiation of the Vanilla genus and diversification by vicariance consecutive to the break-up of Gondwana, 95 million years ago (Mya), was incompatible with the admitted age of origin of Angiosperm. Based on the Vanilloideae age recently estimated to 71 million years ago (Mya), we conclude that the genus Vanilla would have appeared 34 Mya in South America, when continents were already separated. Nevertheless, whatever the two extreme scenarios tested, at least three long distance migration events are needed to explain the present distribution of Vanilla species in tropical areas. These transoceanic dispersions could have occurred via transoceanic passageway such as the Rio Grande Ridge and the involvement of floating vegetation mats and migratory birds. (C) 2010 Elsevier Inc. All rights reserved.
引用
收藏
页码:621 / 630
页数:10
相关论文
共 50 条
  • [1] Phylogenetic analysis of the genus Hexachlamys (Myrtaceae) based on plastid and nuclear DNA sequences and their taxonomic implications
    da Cruz, Fernanda
    Turchetto-Zolet, Andreia C.
    Veto, Nicole
    Mondin, Claudio Augusto
    Sobral, Marcos
    Almerao, Mauricio
    Margis, Rogerio
    BOTANICAL JOURNAL OF THE LINNEAN SOCIETY, 2013, 172 (04) : 532 - 543
  • [2] A phylogenetic analysis of Diurideae (Orchidaceae) based on plastid DNA sequence data
    Kores, PJ
    Molvray, M
    Weston, PH
    Hopper, SD
    Brown, AP
    Cameron, KM
    Chase, MW
    AMERICAN JOURNAL OF BOTANY, 2001, 88 (10) : 1903 - 1914
  • [3] Phylogenetic analysis of Chloraeinae (Orchidaceae) based on plastid and nuclear DNA sequences
    Cisternas, Mauricio A.
    Salazar, Gerardo A.
    Verdugo, Gabriela
    Novoa, Patricio
    Calderon, Ximena
    Negritto, Maria A.
    BOTANICAL JOURNAL OF THE LINNEAN SOCIETY, 2012, 168 (03) : 258 - 277
  • [4] A phylogenetic analysis of Loasaceae subfamily Loasoideae based on plastid DNA sequences
    Hufford, L
    McMahon, MM
    O'Quinn, R
    Poston, ME
    INTERNATIONAL JOURNAL OF PLANT SCIENCES, 2005, 166 (02) : 289 - 300
  • [5] Phylogenetic Analysis of a 'Jewel Orchid' Genus Goodyera (Orchidaceae) Based on DNA Sequence Data from Nuclear and Plastid Regions
    Hu, Chao
    Tian, Huaizhen
    Li, Hongqing
    Hu, Aiqun
    Xing, Fuwu
    Bhattacharjee, Avishek
    Hsu, Tianchuan
    Kumar, Pankaj
    Chung, Shihwen
    PLOS ONE, 2016, 11 (02):
  • [6] Molecular phylogenetic analysis of Violaceae (Malpighiales) based on plastid and nuclear DNA sequences
    Toru Tokuoka
    Journal of Plant Research, 2008, 121 : 253 - 260
  • [7] Molecular phylogenetic analysis of Violaceae (Malpighiales) based on plastid and nuclear DNA sequences
    Tokuoka, Toru
    JOURNAL OF PLANT RESEARCH, 2008, 121 (03) : 253 - 260
  • [8] A phylogenetic analysis of the Arecoid Line of palms based on plastid DNA sequence data
    Hahn, WJ
    MOLECULAR PHYLOGENETICS AND EVOLUTION, 2002, 23 (02) : 189 - 204
  • [9] Species boundaries and phylogenetic relationships within the green algal genus Codium (Bryopsidales) based on plastid DNA sequences
    Verbruggen, Heroen
    Leliaert, Frederik
    Maggs, Christine A.
    Shimada, Satoshi
    Schils, Tom
    Provan, Jim
    Booth, David
    Murphy, Sue
    De Clerck, Olivier
    Littler, Diane S.
    Littler, Mark M.
    Coppejans, Eric
    MOLECULAR PHYLOGENETICS AND EVOLUTION, 2007, 44 (01) : 240 - 254
  • [10] Systematics of Irvingiaceae and Ixonanthaceae (Malpighiales): phylogenetic analysis based on three plastid DNA loci
    Byng, James W.
    Bernardini, Benedetta
    Christenhusz, Maarten J. M.
    Chase, Mark W.
    PHYTOTAXA, 2016, 260 (02) : 157 - 166