A simple tool for neuroimaging data sharing

被引:5
|
作者
Haselgrove, Christian [1 ]
Poline, Jean-Baptiste [1 ]
Kennedy, David N. [1 ]
机构
[1] Univ Massachusetts, Sch Med, Worcester, MA 01655 USA
来源
关键词
neuroinformatics; neuroimaging; quality assessment; data processing; data archiving; SURFACE-BASED ANALYSIS; SEGMENTATION;
D O I
10.3389/fninf.2014.00052
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Data sharing is becoming increasingly common, but despite encouragement and facilitation by funding agencies, journals, and some research efforts, most neuroimaging data acquired today is still not shared due to political, financial, social, and technical barriers to sharing data that remain. In particular, technical solutions are few for researchers that are not a part of larger efforts with dedicated sharing infrastructures, and social barriers such as the time commitment required to share can keep data from becoming publicly available. We present a system for sharing neuroimaging data, designed to be simple to use and to provide benefit to the data provider. The system consists of a server at the International Neuroinformatics Coordinating Facility (INCF) and user tools for uploading data to the server. The primary design principle for the user tools is ease of use: the user identifies a directory containing Digital Imaging and Communications in Medicine (DICOM) data, provides their INCF Portal authentication, and provides identifiers for the subject and imaging session. The user tool anonymizes the data and sends it to the server. The server then runs quality control routines on the data, and the data and the quality control reports are made public. The user retains control of the data and may change the sharing policy as they need. The result is that in a few minutes of the user's time, DICOM data can be anonymized and made publicly available, and an initial quality control assessment can be performed on the data.
引用
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页数:10
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