Splicing, cis genetic variation and disease

被引:18
|
作者
Jensen, Cathy J. [1 ,2 ]
Oldfield, Brian J. [2 ]
Rubio, Justin P. [1 ]
机构
[1] Howard Florey Inst, Dept Neurogenet, Melbourne, Vic 3010, Australia
[2] Monash Univ, Dept Physiol, Fac Hlth Sci Nursing & Med, Melbourne, Vic 3800, Australia
基金
英国医学研究理事会;
关键词
alternative splicing; cis regulatory element; genetic variation; tissue-specific splicing; TRACT-BINDING-PROTEIN; MESSENGER-RNA; SR PROTEINS; IN-VIVO; REGULATORS; EXPRESSION; ENHANCERS; ELEMENTS; FAMILY; EXONS;
D O I
10.1042/BST0371311
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Splicing is a post-transcriptional modification of RNA during which introns are removed and exons are joined. most of the mammalian genes undergo constitutive and alternative splicing events. in addition to the strong signals of the splice sites, splicing is influenced at a distance by a range of trans factors that interact with cis regulatory elements and influence the spliceosome. The intention of the present mini-review is to give some insights into the complexity of this interaction and to introduce the consequences of some kinds of detrimental genetic variation on alternative splicing and disease.
引用
收藏
页码:1311 / 1315
页数:5
相关论文
共 50 条
  • [1] Splicing: linking genetic variation and disease
    Denise Waldron
    [J]. Nature Reviews Genetics, 2016, 17 : 317 - 317
  • [2] Splicing: linking genetic variation and disease
    Waldron, Denise
    [J]. NATURE REVIEWS GENETICS, 2016, 17 (06) : 317 - 317
  • [3] RNA splicing is a primary link between genetic variation and disease
    Li, Yang I.
    van de Geijn, Bryce
    Raj, Anil
    Knowles, David A.
    Petti, Allegra A.
    Golan, David
    Gilad, Yoav
    Pritchard, Jonathan K.
    [J]. SCIENCE, 2016, 352 (6285) : 600 - 604
  • [4] Genetic variation and alternative splicing
    Estivill, Xavier
    [J]. NATURE BIOTECHNOLOGY, 2015, 33 (04) : 357 - 359
  • [5] Genetic variation and alternative splicing
    Xavier Estivill
    [J]. Nature Biotechnology, 2015, 33 : 357 - 359
  • [6] Background splicing as a predictor of aberrant splicing in genetic disease
    Alexieva, D.
    Long, Y.
    Sarkar, R.
    Dhayan, H.
    Bruet, E.
    Winston, Rm
    Vorechovsky, I
    Castellano, L.
    Dibb, N. J.
    [J]. RNA BIOLOGY, 2022, 19 (01) : 256 - 265
  • [7] Genetic and epigenetic dissection of cis regulatory variation
    Zhang, Xu
    Richards, Eric J.
    Borevitz, Justin O.
    [J]. CURRENT OPINION IN PLANT BIOLOGY, 2007, 10 (02) : 142 - 148
  • [8] Identification of common genetic variation that modulates alternative splicing
    Hull, Jeremy
    Campino, Susana
    Rowlands, Kate
    Chan, Man-Suen
    Copley, Richard R.
    Taylor, Martin S.
    Rockett, Kirk
    Elvidge, Gareth
    Keating, Brendan
    Knight, Julian
    Kwiatkowski, Dominic
    [J]. PLOS GENETICS, 2007, 3 (06) : 1009 - 1018
  • [9] Mapping the cis-regulatory architecture of the human retina reveals noncoding genetic variation in disease
    Cherry, Timothy J.
    Yang, Marty G.
    Harmin, David A.
    Tao, Peter
    Timms, Andrew E.
    Bauwens, Miriam
    Allikmets, Rando
    Jones, Evan M.
    Chen, Rui
    De Baere, Elfride
    Greenberg, Michael E.
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2020, 117 (16) : 9001 - 9012
  • [10] The splicing machinery is a genetic modifier of disease severity
    Nissim-Rafinia, M
    Kerem, B
    [J]. TRENDS IN GENETICS, 2005, 21 (09) : 480 - 483