Single-cell biology to decode the immune cellular composition of kidney inflammation

被引:4
|
作者
Zhao, Yu [1 ,2 ,3 ,4 ]
Panzer, Ulf [1 ]
Bonn, Stefan [1 ,2 ,3 ]
Krebs, Christian F. [1 ,4 ]
机构
[1] Univ Med Ctr Hamburg Eppendorf, Hamburg Ctr Translat Immunol HCTI, Hamburg, Germany
[2] Univ Med Ctr Hamburg Eppendorf, Inst Med Syst Biol, Hamburg, Germany
[3] Univ Med Ctr Hamburg Eppendorf, Ctr Biomed AI, Hamburg, Germany
[4] Univ Med Ctr Hamburg Eppendorf, Dept Med, Translat Immunol 3, Hamburg, Germany
关键词
Single-cell biology; Single-cell RNA profiling; Renal function; T-CELLS; LANDSCAPE; TECHNOLOGIES; EPITOPE; FATE;
D O I
10.1007/s00441-021-03483-y
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
Single-cell biology is transforming the ability of researchers to understand cellular signaling and identity across medical and biological disciplines. Especially for immune-mediated diseases, a single-cell look at immune cell subtypes, signaling, and activity might yield fundamental insights into the disease etiology, mechanisms, and potential therapeutic interventions. In this review, we highlight recent advances in the field of single-cell RNA profiling and their application to understand renal function in health and disease. With a focus on the immune system, in particular on T cells, we propose some key directions of understanding renal inflammation using single-cell approaches. We detail the benefits and shortcomings of the various technological approaches outlined and give advice on potential pitfalls and challenges in experimental setup and computational analysis. Finally, we conclude with a brief outlook into a promising future for single-cell technologies to elucidate kidney function.
引用
收藏
页码:435 / 443
页数:9
相关论文
共 50 条
  • [1] Single-cell biology to decode the immune cellular composition of kidney inflammation
    Yu Zhao
    Ulf Panzer
    Stefan Bonn
    Christian F. Krebs
    Cell and Tissue Research, 2021, 385 : 435 - 443
  • [2] Preeclampsia on a Single-Cell Scale: Immune System and Inflammation
    Skarbianskis, Niv
    Admati, Inbal
    Hochgerner, Hannah
    Ophir, Osnat
    Yagel, Simcha
    Solt, Ido
    Zeisel, Amit
    REPRODUCTIVE SCIENCES, 2023, 30 : 243A - 243A
  • [3] Exploring the single-cell immune landscape of kidney allograft inflammation using imaging mass cytometry
    Alexander, Mariam P.
    Zaidi, Mark
    Larson, Nicholas
    Mullan, Aidan
    Pavelko, Kevin D.
    Stegall, Mark D.
    Bentall, Andrew
    Wouters, Bradly G.
    McKee, Trevor
    Taner, Timucin
    AMERICAN JOURNAL OF TRANSPLANTATION, 2024, 24 (04) : 549 - 563
  • [4] Single-cell biology
    不详
    NATURE, 2017, 547 (7661) : 19 - 19
  • [5] Single-cell biology
    Nature, 2017, 547 : 19 - 19
  • [6] Understanding the Biology and Pathogenesis of the Kidney by Single-Cell Transcriptomic Analysis
    Ye, Yuting
    Song, Hui
    Zhang, Jiong
    Shi, Shaolin
    KIDNEY DISEASES, 2018, 4 (04) : 214 - 225
  • [7] Urinary Single-Cell Profiling Captures the Cellular Diversity of the Kidney
    Abedini, Amin
    Zhu, Yuan O.
    Chatterjee, Shatakshee
    Halasz, Gabor
    Devalaraja-Narashimha, Kishor
    Shrestha, Rojesh
    Balzer, Michael S.
    Park, Jihwan
    Zhou, Tong
    Ma, Ziyuan
    Sullivan, Katie Marie
    Hu, Hailong
    Sheng, Xin
    Liu, Hongbo
    Wei, Yi
    Boustany-Kari, Carine M.
    Patel, Uptal
    Almaani, Salem
    Palmer, Matthew
    Townsend, Raymond
    Blady, Shira
    Hogan, Jonathan
    Morton, Lori
    Susztak, Katalin
    JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY, 2021, 32 (03): : 614 - 627
  • [8] Dynamic cellular composition and immune landscape revealed by single-cell transcriptome profiling in a brain arteriovenous malformation
    Liu, Yutong
    Niu, Hongchuan
    Zhang, Junze
    Liang, Rui
    Zhou, Zhenyu
    Lei, Chengxu
    He, Shihao
    Lu, Changyu
    Zhao, Yuanli
    FUNCTIONAL & INTEGRATIVE GENOMICS, 2025, 25 (01)
  • [9] Single-cell analysis reveals alterations in cellular composition and cell-cell communication associated with airway inflammation and remodeling in asthma
    Yu, Xiu
    Li, Lifei
    Cai, Bicheng
    Zhang, Wei
    Liu, Quan
    Li, Nan
    Shi, Xing
    Yu, Li
    Chen, Rongchang
    Qiu, Chen
    RESPIRATORY RESEARCH, 2024, 25 (01)
  • [10] Single-cell analysis reveals alterations in cellular composition and cell-cell communication associated with airway inflammation and remodeling in asthma
    Xiu Yu
    Lifei Li
    Bicheng Cai
    Wei Zhang
    Quan Liu
    Nan Li
    Xing Shi
    Li Yu
    Rongchang Chen
    Chen Qiu
    Respiratory Research, 25