Temperate and tropical coastal waters share relatively similar microbial biofilm communities while free-living or particle-attached communities are distinct

被引:13
|
作者
Catao C. P., Elisa [1 ]
Pollet, Thomas [1 ,2 ]
Garnier, Cedric [3 ]
Barry-Martinet, Raphaelle [1 ]
Rehel, Karine [4 ]
Linossier, Isabelle [4 ]
Tunin-Ley, Alina [5 ]
Turquet, Jean [5 ]
Briand, Jean-Francois [1 ]
机构
[1] Univ Toulon & Var, Lab MAPIEM, EA 4323, CS 60584, F-83041 Toulon 9, France
[2] Univ Montpellier, UMR ASTRE, CIRAD, INRAE, Montpellier, France
[3] Aix Marseille Univ, Univ Toulon, Mediterranean Inst Oceanog, CNRS INSU,IRD,MIO UM 110, La Garde, France
[4] Univ Bretagne Sud, Inst Europeen Mer, EA 3884, LBCM, Lorient, France
[5] CYROI, CITEB, St Clotilde, Reunion, France
关键词
environmental drivers; geographical effect; lifestyle; marine biofilms; prokaryotes;
D O I
10.1111/mec.15929
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Free-living (FL) marine microbial communities differ from those attached to particles (PA). Likewise, biofilms (B) colonizing artificial surfaces, including plastics or ship hulls, hardly resemble their planktonic surroundings. However, few studies have examined the effect of the environment on these lifestyles and on the source of organisms colonizing marine surfaces. Using 16S rRNA gene metabarcoding, we identified specificities of marine prokaryotic community lifestyles (FL, PA or B) sampled in three coastal polluted locations with dissimilar environmental conditions: the North-Western Mediterranean Sea and the Atlantic and Indian Oceans. Biofilms developed over polyvinyl chloride (PVC) were found to be significantly different from FL or PA collected during the immersions. Alpha-diversity increased from FL to PA and to B, illustrating the integrative aspect of the latter, with little proportion of operational taxonomic units shared with the first two. Beta-diversity clustered first the lifestyles and then the sites. FL and PA were more affected by water quality, especially by trace metal contamination, whereas B were as sensitive to trace metals as to nutrients. Although biofilms should be supplied by the planktonic (ultra) rare biosphere, source tracking could only detect small contributions of FL or PA taxa to B communities.
引用
收藏
页码:2891 / 2904
页数:14
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