GWAS Identifies 44 Independent Associated Genomic Loci for Self-Reported Adult Hearing Difficulty in UK Biobank

被引:94
|
作者
Wells, Helena R. R. [1 ,2 ]
Freidin, Maxim B. [1 ]
Abidin, Fatin N. Zainul [2 ,3 ]
Payton, Antony [4 ]
Dawes, Piers [5 ]
Munro, Kevin J. [5 ,6 ]
Morton, Cynthia C. [5 ,6 ,7 ,8 ]
Moore, David R. [5 ,9 ]
Dawson, Sally J. [2 ]
Williams, Frances M. K. [1 ]
机构
[1] Kings Coll London, Sch Life Course Sci, Dept Twin Res & Genet Epidemiol, London SE1 7EH, England
[2] UCL, UCL Ear Inst, London WC1X 8EE, England
[3] UCL, Dept Med Phys & Biomed Engn, Ctr Med Image Comp, London WC1E 7JE, England
[4] Univ Manchester, Div Informat Imaging & Data Sci, Manchester M13 9PT, Lancs, England
[5] Univ Manchester, Manchester Ctr Audiol & Deafness, Manchester M13 9PL, Lancs, England
[6] Manchester Univ Hosp NHS Fdn Trust, Manchester Acad Hlth Sci Ctr, Manchester M13 9WL, Lancs, England
[7] Harvard Med Sch, Brigham & Womens Hosp, Dept Obstet & Gynecol, Boston, MA 02115 USA
[8] Harvard Med Sch, Brigham & Womens Hosp, Dept Pathol, Boston, MA 02115 USA
[9] Univ Cincinnati, Coll Med, Dept Otolaryngol, Cincinnati Childrens Hosp Med Ctr, Cincinnati, OH 45229 USA
基金
英国经济与社会研究理事会; 英国惠康基金; 英国医学研究理事会;
关键词
MIXED-MODEL ANALYSIS; WIDE ASSOCIATION; MESSENGER-RNA; AGE; MUTATIONS; PROTEIN; IMPAIRMENT; GENE; EYA4; HERITABILITY;
D O I
10.1016/j.ajhg.2019.09.008
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Age-related hearing impairment (ARHI) is the most common sensory impairment in the aging population; a third of individuals are affected by disabling hearing loss by the age of 65. It causes social isolation and depression and has recently been identified as a risk factor for dementia. The genetic risk factors and underlying pathology of ARHI are largely unknown, meaning that targets for new therapies remain elusive, yet heritability estimates range between 35% and 55%. We performed genome-wide association studies (GWASs) for two self-reported hearing phenotypes, using more than 250,000 UK Biobank (UKBB) volunteers aged between 40 and 69 years. Forty-four independent genome-wide significant loci (p < 5E-08) were identified, considerably increasing the number of established trait loci. Thirty-four loci are novel associations with hearing loss of any form, and only one of the ten known hearing loci has a previously reported association with an ARHI-related trait. Gene sets from these loci are enriched in auditory processes such as synaptic activities, nervous system processes, inner ear morphology, and cognition, while genetic correlation analysis revealed strong positive correlations with multiple personality and psychological traits for the first time. Immunohistochemistry for protein localization in adult mouse cochlea implicate metabolic, sensory, and neuronal functions for NID2, CLRN2, and ARHGEF28. These results provide insight into the genetic landscape underlying ARHI, opening up novel therapeutic targets for further investigation. In a wider context, our study also highlights the viability of using self-report phenotypes for genetic discovery in very large samples when deep phenotyping is unavailable.
引用
收藏
页码:788 / 802
页数:15
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