Bovine satellite DNAs - a history of the evolution of complexity and its impact in the Bovidae family

被引:11
|
作者
Escudeiro, A. [1 ,2 ]
Ferreira, D. [1 ,2 ]
Mendes-Da-Silva, A. [1 ,2 ]
Heslop-Harrison, J. S. [3 ]
Adega, F. [1 ,2 ]
Chaves, R. [1 ,2 ]
机构
[1] Univ Tras Os Montes & Alto Douro UTAD, DGB, CAG, Lab Cytogen & Anim Genom, Vila Real, Portugal
[2] Univ Lisbon, Fac Sci, Biosyst & Integrat Sci Inst BioISI, Lisbon, Portugal
[3] Univ Leicester, Dept Genet & Genome Biol, Leicester, Leics, England
来源
EUROPEAN ZOOLOGICAL JOURNAL | 2019年 / 86卷 / 01期
关键词
Satellite DNA; Bovidae family; evolution; genome remodelling; karyotype reorganisation; REPETITIVE DNA; LONG-RANGE; ROBERTSONIAN TRANSLOCATION; CHROMOSOMAL DISTRIBUTION; CONSTITUTIVE HETEROCHROMATIN; NUCLEOTIDE-SEQUENCE; CONCERTED EVOLUTION; TISSUE-SPECIFICITY; I DNA; CATTLE;
D O I
10.1080/24750263.2018.1558294
中图分类号
Q95 [动物学];
学科分类号
071002 ;
摘要
Despite the many questions regarding satellite DNA sequences and their cellular roles, the evolutionary history of eukaryotic genomes seems to have been largely influenced by this dynamic and multifaceted genomic component. The bovine genome is highly rich in diverse satDNA sequences that differ in monomer sequence and length, complexity, chromosomal location and abundance, as well as in their sequences' evolutionary mechanisms. In the evolution of the Bovidae family, the genomes' repetitive fraction played a central role in karyotype reorganisation, and in the last few decades several studies have demonstrated and reinforced an association between centromeric satDNAs and the process of chromosome evolution in remodelling genomes of Bovidae species. Here, we review different aspects of the molecular nature and genome behaviour of all the satDNA families identified in the bovine genome, including their organisation, abundance, chromosome localisation, variation in sequence, and evolutionary history in the Bovidae family and in particular in the Bovinae subfamily, taking an integrative perspective. "Evolution and satDNA" can be addressed through two complementary views: the satDNA sequence evolution per se, and genome evolution promoted by the satDNA dynamism. SatDNA both provides phylogenetic information and is a critical genomic component that enables sequence and chromosome evolution -features arising from its presence, absence or alteration.
引用
收藏
页码:20 / 37
页数:18
相关论文
共 30 条
  • [1] Evolutionary history of bovine endogenous retroviruses in the Bovidae family
    Garcia-Etxebarria, Koldo
    Jugo, Begona M.
    [J]. BMC EVOLUTIONARY BIOLOGY, 2013, 13
  • [2] Evolutionary history of bovine endogenous retroviruses in the Bovidae family
    Koldo Garcia-Etxebarria
    Begoña M Jugo
    [J]. BMC Evolutionary Biology, 13
  • [3] Chromosomal and satellite (1.709 family) DNA analysis in Bovini and Tragelaphini tribes: Chromosome evolution inferences within the Bovidae family
    Adega, F
    Chaves, R
    Heslop-Harrison, JS
    Guedes-Pinto, H
    Wienberg, J
    [J]. CYTOGENETIC AND GENOME RESEARCH, 2004, 106 (01) : 13 - 13
  • [4] Physical organization of the 1.709 satellite IV DNA family in Bovini and Tragelaphini tribes of the Bovidae: sequence and chromosomal evolution
    Adega, F.
    Chaves, R.
    Guedes-Pinto, H.
    Heslop-Harrison, J. S.
    [J]. CYTOGENETIC AND GENOME RESEARCH, 2006, 114 (02) : 140 - 146
  • [6] Evolution of satellite DNAs in a radiation of endemic Hawaiian spiders: Does concerted evolution of highly repetitive sequences reflect evolutionary history?
    Pons, J
    Gillespie, RG
    [J]. JOURNAL OF MOLECULAR EVOLUTION, 2004, 59 (05) : 632 - 641
  • [7] Evolution of Satellite DNAs in a Radiation of Endemic Hawaiian Spiders: Does Concerted Evolution of Highly Repetitive Sequences Reflect Evolutionary History?
    Joan Pons
    Rosemary G. Gillespie
    [J]. Journal of Molecular Evolution, 2004, 59 : 632 - 641
  • [8] The broadband GEO satellite market and its impact on launch vehicle evolution
    Hubbel, YC
    [J]. COLLECTION OF THE 18TH AIAA INTERNATIONAL COMMUNICATIONS SATELLITE SYSTEMS CONFERENCE AND EXHIBIT, TECHNICAL PAPERS, VOLS 1 AND 2, 2000, : 113 - 126
  • [9] The impact of family history of hepatocellular carcinoma on its patients' survival
    Wing Chiu Dai
    Sheung Tat Fan
    Tan To Cheung
    Kenneth SH Chok
    Albert CY Chan
    Simon HY Tsang
    Ronnie TP Poon
    Chung Mau Lo
    [J]. Hepatobiliary & Pancreatic Diseases International, 2012, (02) : 160 - 164
  • [10] The impact of family history of hepatocellular carcinoma on its patients' survival
    Dai, Wing Chiu
    Fan, Sheung Tat
    Cheung, Tan To
    Chok, Kenneth S. H.
    Chan, Albert C. Y.
    Tsang, Simon H. Y.
    Poon, Ronnie T. P.
    Lo, Chung Mau
    [J]. HEPATOBILIARY & PANCREATIC DISEASES INTERNATIONAL, 2012, 11 (02) : 160 - 164