Characterization of an Unusual DS-1-Like G8P[8] Rotavirus Strain from Japan in 2017: Evolution of Emerging DS-1-Like G8P[8] Strains through Reassortment

被引:14
|
作者
Kamiya, Hajime [1 ]
Tacharoenmuang, Ratana [2 ,3 ]
Ide, Tomihiko [2 ]
Negoro, Manami [4 ]
Tanaka, Takaaki [6 ]
Asad, Kazutoyo [5 ]
Nakamur, Haruna [5 ]
Sugiur, Katsumi [5 ]
Umemoto, Masakazu [7 ]
Kuroki, Haruo [8 ]
Ito, Hiroaki [9 ]
Tanaka, Shigeki [10 ]
It, Mitsue [11 ]
Fukuda, Saori [2 ]
Hatazawa, Riona [2 ]
Hara, Yuya [2 ]
Guntapong, Ratigorn [3 ]
Murata, Takayuki [2 ]
Taniguchi, Kiyosu [5 ]
Suga, Shigeru [5 ]
Nakano, Takashi [6 ]
Taniguchi, Koki [2 ]
Komoto, Satoshi [2 ]
机构
[1] Natl Inst Infect Dis, Infect Dis Surveillance Ctr, Tokyo 1628640, Japan
[2] Fujita Hlth Univ, Sch Med, Dept Virol & Parasitol, Toyoake, Aichi 4701192, Japan
[3] Natl Inst Hlth, Dept Med Sci, Nonthaburi, Thailand
[4] Natl Mie Hosp, Inst Clin Res, Tsu, Mie 5140125, Japan
[5] Natl Mie Hosp, Dept Pediat, Tsu, Mie 5140125, Japan
[6] Kawasaki Med Sch, Dept Pediat, Okayama 7008505, Japan
[7] Umemoto Childrens Clin, Tsu, Mie 5140004, Japan
[8] Sotobo Childrens Clin, Chiba 2994503, Japan
[9] Kameda Med Ctr, Dept Pediat, Chiba 2968602, Japan
[10] Mie Chuo Med Ctr, Dept Pediat, Tsu, Mie 5141101, Japan
[11] Japanese Red Cross Ise Hosp, Dept Pediat, Ise, Mie 5168512, Japan
关键词
PREDOMINANCE; CHILDREN;
D O I
10.7883/yoken.JJID.2018.484
中图分类号
R51 [传染病];
学科分类号
100401 ;
摘要
The emergence of unusual DS-1-like intergenogroup reassortant rotaviruses with a bovine like G8 genotype (DS-1-like G8P[8] strains) has been reported in several Asian countries. During the rotavirus surveillance program in Japan in 2017, a DS-1-like G8P[8] strain (RVA/Human-wt/JPN/SO1162/2017/G8P[8]) was identified in 43 rotavirus-positive stool samples. Strain SO1162 was shown to have a unique genotype constellation, including genes from both genogroup 1 and 2: G8-P[8]-12-R2-C2-M2-A2-N2-T2-E2-H2. Phylogenetic analysis revealed that the VP1 gene of strain SO1162 appeared to have originated from DS-1-like GIP[8] strains from Thailand and Vietnam, while the remaining 10 genes were closely related to those of previously reported DS-1-like G8P[8] strains. Thus, SO1162 was suggested to be a reassortant strain that acquired the VP1 gene from Southeast Asian DS-1-like G1P[8] strains on the genetic background of co-circulating DS-1-like G8P[8] strains. Our findings provide important insights into the evolutionary dynamics of emerging DS-1-like G8P[8] strains.
引用
收藏
页码:256 / 260
页数:5
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