The complete chloroplast genome of a traditional medicinal and food plant, Polygonatum humile (Asparagaceae, Asparagales)

被引:3
|
作者
Lee, Shiou Yih [1 ]
Zou, Yanli [1 ]
Liao, Wenbo [1 ]
Fan, Qiang [1 ]
机构
[1] Sun Yat Sen Univ, Sch Life Sci, State Key Lab Biocontrol & Guangdong Prov, Key Lab Plant Resources, Guangzhou 510275, Guangdong, Peoples R China
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2019年 / 4卷 / 02期
关键词
Genomic resources; Illumina sequencing; Nolinoideae; phylogenomics; rhizomatous herb;
D O I
10.1080/23802359.2019.1666044
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Polygonatum humile (Asparagaceae) is a medicinal and food plant that is naturally distributed in the North East Asia region and East of Russia. Here we report on the complete chloroplast (cp) genome sequence of P. humile. The cp genome is 155,313 bp in size and includes two inverted repeat regions of 26,302 bp each, which is separated by a large single-copy region of 84,239 bp and a small single-copy region of 18,470 bp. A total of 132 genes were predicted, including 39 tRNA, 8 rRNA, and 85 protein-coding genes. Phylogenetic analysis placed P. humile under the subfamily Nolinoideae of the family Asparagaceae.
引用
收藏
页码:3184 / 3185
页数:2
相关论文
共 50 条
  • [1] Complete chloroplast genome of a medicinal species Polygonatum kingianum in China (Asparagaceae, Asparagales)
    Jin, Jian
    Lao, Jia
    Zhong, Can
    He, Wei
    Xie, Jing
    Hu, Guoan
    Liu, Hao
    Yan, Fulin
    Zhang, Shuihan
    [J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (01): : 959 - 960
  • [2] The complete chloroplast genome of Polygonatum falcatum (Asparagaceae)
    Choi, Tae-Young
    Yun, Se-Hyun
    Lee, Soo-Rang
    [J]. KOREAN JOURNAL OF PLANT TAXONOMY, 2022, 52 (01): : 80 - 83
  • [3] The complete chloroplast genome of Agave amaniensis (Asparagales: Asparagaceae: Agavoideae)
    Xu, Bochao
    Tan, Shibei
    Qin, Xu
    Huang, Xing
    Xi, Jingen
    Chen, Helong
    Qin, Jianfeng
    Chen, Tao
    Yi, Kexian
    [J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2022, 7 (08): : 1519 - 1521
  • [4] Characterization of the chloroplast genome of a rare species Polygonatum sp. in China (Asparagaceae, Asparagales)
    Zhong, Can
    Lao, Jia
    Jin, Jian
    He, Wei
    Xie, Jing
    Liu, Hao
    Qin, You
    Zhang, Shuihan
    [J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (01): : 994 - 995
  • [5] Characterization of the complete chloroplast genome of Asparagus filicinus (Asparagaceae: Asparagoideae: Asparagus), a traditional Tibetan medicinal plant
    Li, Qien
    Li, Xianjia
    Duojie
    Duojie, Dongzhi
    Cairen, Banma
    Guo, Xiao
    [J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 3135 - 3136
  • [6] Characterization of the complete chloroplast genome sequence of Agave durangensis (Asparagales: Asparagaceae: Agavoideae)
    Gonzalez-Trillo, Ana Carolina
    Lopez, Miguel Angel Reyes
    Almaraz-Abarca, Norma
    Herrera-Arrieta, Yolanda
    Gutierrez-Velazquez, Marcela Veronica
    Barraza Salas, Marcelo
    Monreal-Garcia, Hugo Manuel
    Torres-Ricario, Rene
    [J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2024, 9 (04): : 536 - 540
  • [7] The complete chloroplast genome of Bupleurum euphorbioides, a traditional medicinal plant
    Park, Seong-Sik
    Jang, Ji-Hun
    Lee, Kyung-Min
    Lim, Seo-Young
    Seo, Jae-Wan
    Kim, Sun-Ra
    Jung, Ho-Kyung
    Cho, Hyun-Woo
    [J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (04): : 1332 - 1334
  • [8] The complete chloroplast genome of Bupleurum euphorbioides, a traditional medicinal plant
    Park, Seong-Sik
    Jang, Ji-Hun
    Lee, Kyung-Min
    Lim, Seo-Young
    Seo, Jae-Wan
    Kim, Sun-Ra
    Jung, Ho-Kyung
    Cho, Hyun-Woo
    [J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (03): : 870 - 871
  • [9] The complete chloroplast genome of Polygonatum zanlanscianense (Pampanini, 1915) (Asparagaceae), an adulterants of Polygonati rhizoma
    Shi, Naixing
    Li, Li
    Wang, Shuying
    Yang, Zhenyan
    Wen, Guosong
    [J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (08): : 2420 - 2421
  • [10] First record of the complete chloroplast genome of Polygonatum infundiflorum (Asparagaceae), a Korean endemic species
    Lee, Se Ryeong
    Ha, Young-Ho
    Son, Dong Chan
    Kim, Sang-Chul
    [J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2023, 8 (05): : 603 - 606