Genome sequence and description of the mosquitocidal and heavy metal tolerant strain Lysinibacillus sphaericus CBAM5

被引:28
|
作者
David Pena-Montenegro, Tito [1 ]
Lozano, Lucia [1 ]
Dussan, Jenny [1 ]
机构
[1] Univ Los Andes, Ctr Invest Microbiol CIMIC, Bogota, Colombia
来源
关键词
Lysinibacillus sphaericus CBAM5; DNA homology; Binary toxins; Mosquitocidal toxins; S-layer proteins; Heavy metal tolerance; BACILLUS-SPHAERICUS; SP-NOV; COMB; NOV; BACTERIA; TOXIN; DATABASE; ANNOTATION; ALGORITHMS; FUSIFORMIS; PROPOSAL;
D O I
10.1186/1944-3277-10-2
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Lysinibacillus sphaericus CBAM5, was isolated from subsurface soil of oil well explorations in the Easter Planes of Colombia. This strain has potential in bioremediation of heavy-metal polluted environments and biological control of Culex quinquefasciatus. According to the phylogenetic analysis of 16S rRNA gene sequences, the strain CBAM5 was assigned to the Lysinibacillus sphaericus taxonomic group 1 that comprises mosquito pathogenic strains. After a combination assembly-integration, alignment and gap-filling steps, we propose a 4,610,292 bp chromosomal scaffold. The whole genome (consisting of 5,146,656 bp long, 60 contigs and 5,209 predicted-coding sequences) revealed strong functional and syntenial similarities to the L. sphaericus C3-41 genome. Mosquitocidal (Mtx), binary (Bin) toxins, cereolysin O, and heavy metal resistance clusters from nik, ars, czc, mnt, ter, cop, cad, and znu operons were identified.
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页数:10
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