Emerging ultrafast nucleic acid amplification technologies for next-generation molecular diagnostics

被引:69
|
作者
Lee, Sang Hun [1 ]
Park, Seung-min [2 ]
Kim, Brian N. [3 ]
Kwon, Oh Seok [4 ]
Rho, Won-Yep [5 ]
Jun, Bong-Hyun [6 ]
机构
[1] Univ Calif Berkeley, Dept Bioengn, Berkeley, CA 94720 USA
[2] Stanford Univ, Dept Radiol, Stanford, CA 94305 USA
[3] Univ Cent Florida, Dept Elect & Comp Engn, Orlando, FL 32816 USA
[4] Korea Res Inst Biosci & Biotechnol, Infect Dis Res Ctr, Daejeon, South Korea
[5] Chonbuk Natl Univ, Sch Int Engn & Sci, Jeonju, South Korea
[6] Konkuk Univ, Dept Biosci & Biotechnol, Seoul, South Korea
来源
基金
新加坡国家研究基金会;
关键词
Nucleic acid amplification test; Ultrafast polymerase chain reaction; Isothermal amplification; Point-of-care testing; Artificial intelligence; POLYMERASE-CHAIN-REACTION; MEDIATED ISOTHERMAL AMPLIFICATION; STRAND DISPLACEMENT AMPLIFICATION; CONTINUOUS-FLOW PCR; REAL-TIME PCR; DNA AMPLIFICATION; ENZYMATIC AMPLIFICATION; MESSENGER-RNAS; HEAT-TRANSFER; BETA-GLOBIN;
D O I
10.1016/j.bios.2019.111448
中图分类号
Q6 [生物物理学];
学科分类号
071011 ;
摘要
Over the last decade, nucleic acid amplification tests (NAATs) including polymerase chain reaction (PCR) were an indispensable methodology for diagnosing cancers, viral and bacterial infections owing to their high sensitivity and specificity. Because the NAATs can recognize and discriminate even a few copies of nucleic acid (NA) and species-specific NA sequences, NAATs have become the gold standard in a wide range of applications. However, limitations of NAAT approaches have recently become more apparent by reason of their lengthy run time, large reaction volume, and complex protocol. To meet the current demands of clinicians and biomedical researchers, new NAATs have developed to achieve ultrafast sample-to-answer protocols for the point-of-care testing (POCT). In this review, ultrafast NA-POCT platforms are discussed, outlining their NA amplification principles as well as delineating recent advances in ultrafast NAAT applications. The main focus is to provide an overview of NA-POCT platforms in regard to sample preparation of NA, NA amplification, NA detection process, interpretation of the analysis, and evaluation of the platform design. Increasing importance will be given to innovative, ultrafast amplification methods and tools which incorporate artificial intelligence (AI)-associated data analysis processes and mobile-healthcare networks. The future prospects of NA POCT platforms are promising as they allow absolute quantitation of NA in individuals which is essential to precision medicine.
引用
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页数:18
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