Navigation satellite clock Autonomous integrity monitoring, as an important content of navigation satellite autonomous integrity monitoring, is paid more and more attention by professional. The failure mode of navigation satellite clock abroad is introduced, and the effect to the system performance is analyzed. Aiming at the requirement of navigation satellite clock autonomous integrity monitoring, referencing the headway and development trend of the technology of navigation satellite clock autonomous integrity monitoring abroad, a scheme of navigation satellite clock autonomous integrity monitoring is presented. The critical technology is summarized, and the approach of implementation is discussed. The completeness of monitoring item and the feasibility of the scheme are validated through technology analysis. The suggestion that COMPASS should have or enhance clock autonomous integrity monitoring capability is put forward.