A 5-gene prognostic nomogram predicting survival probability of glioblastoma patients

被引:7
|
作者
Wang, Lingchen [1 ,2 ]
Yan, Zhengwei [3 ]
He, Xiaona [1 ,2 ]
Zhang, Cheng [3 ]
Yu, Huiqiang [1 ,2 ]
Lu, Quqin [1 ,2 ]
机构
[1] Nanchang Univ, Sch Publ Hlth, Dept Biostat & Epidemiol, Nanchang, Jiangxi, Peoples R China
[2] Nanchang Univ, Jiangxi Prov Key Lab Prevent Med, Nanchang, Jiangxi, Peoples R China
[3] Nanchang Univ, Affiliated Hosp 1, Ctr Expt Med, Nanchang, Jiangxi, Peoples R China
来源
BRAIN AND BEHAVIOR | 2019年 / 9卷 / 04期
基金
中国国家自然科学基金;
关键词
differentially expressed genes; glioblastoma; overall survival; prediction method; prognostic nomogram; SCR_001175; SCR_001905; SCR_003193; SCR_005012; SCR_006472; SCR_006786; SCR_010943; SCR_012802; survival probability; EXPRESSION PROFILES; IDENTIFICATION; MECHANISM; GLIOMAS; GENES;
D O I
10.1002/brb3.1258
中图分类号
B84 [心理学]; C [社会科学总论]; Q98 [人类学];
学科分类号
03 ; 0303 ; 030303 ; 04 ; 0402 ;
摘要
Background Glioblastoma (GBM) remains the most biologically aggressive subtype of gliomas with an average survival of 10 to 12 months. Considering that the overall survival (OS) of each GBM patient is a key factor in the treatment of individuals, it is meaningful to predict the survival probability for GBM patients newly diagnosed in clinical practice. Material and Methods Using the TCGA dataset and two independent GEO datasets, we identified genes that are associated with the OS and differentially expressed between GBM tissues and the adjacent normal tissues. A robust likelihood-based survival modeling approach was applied to select the best genes for modeling. After the prognostic nomogram was generated, an independent dataset on different platform was used to evaluate its effectiveness. Results We identified 168 differentially expressed genes associated with the OS. Five of these genes were selected to generate a gene prognostic nomogram. The external validation demonstrated that 5-gene prognostic nomogram has the capability of predicting the OS of GBM patients. Conclusion We developed a novel and convenient prognostic tool based on five genes that exhibited clinical value in predicting the survival probability for newly diagnosed GBM patients, and all of these five genes could represent potential target genes for the treatment of GBM. The development of this model will provide a good reference for cancer researchers.
引用
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页数:9
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