The impact of chromatin dynamics on plant light responses and circadian clock function

被引:47
|
作者
Barneche, Fredy [1 ,2 ,3 ]
Malapeira, Jordi [4 ]
Mas, Paloma [4 ]
机构
[1] Ecole Normale Super, Environm & Evolutionary Genom Sect, Inst Biol, IBENS, F-75005 Paris, France
[2] INSERM, U1024, F-75005 Paris, France
[3] CNRS, UMR 8197, F-75005 Paris, France
[4] Consortium CSIC IRTA UAB UB, CRAG, Barcelona 08193, Spain
关键词
Chromatin; circadian clock; gene expression; histone modifications; light signalling; plant; HISTONE H2B MONOUBIQUITINATION; SHADE-AVOIDANCE-RESPONSE; TRANSCRIPTION FACTOR HY5; FLOWERING-LOCUS-C; ARABIDOPSIS-THALIANA; GENE-EXPRESSION; UV-B; DNA METHYLATION; MEDIATED DEVELOPMENT; EPIGENETIC VARIATION;
D O I
10.1093/jxb/eru011
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
Research on the functional properties of nucleosome structure and composition dynamics has revealed that chromatin-level regulation is an essential component of light signalling and clock function in plants, two processes that rely extensively on transcriptional controls. In particular, several types of histone post-translational modifications and chromatin-bound factors act sequentially or in combination to establish transcriptional patterns and to fine-tune the transcript abundance of a large repertoire of light-responsive genes and clock components. Cytogenetic approaches have also identified light-induced higher-order chromatin changes that dynamically organize the condensation of chromosomal domains into sub-nuclear foci containing silenced repeat elements. In this review, we report recently identified molecular actors that establish chromatin state dynamics in response to light signals such as photoperiod, intensity, and spectral quality. We also highlight the chromatin-dependent mechanisms that contribute to the 24-h circadian gene expression and its impact on plant physiology and development. The commonalities and contrasts of light-and clock-associated chromatin-based mechanisms are discussed, with particular emphasis on their impact on the selective regulation and rapid modulation of responsive genes.
引用
收藏
页码:2895 / 2913
页数:19
相关论文
共 50 条
  • [1] The Plant Circadian Clock and Chromatin Modifications
    Yang, Ping
    Wang, Jianhao
    Huang, Fu-Yu
    Yang, Songguang
    Wu, Keqiang
    GENES, 2018, 9 (11):
  • [2] Somatostatin regulates central clock function and circadian responses to light
    Joye, Deborah A. M.
    Rohr, Kayla E.
    Suenkens, Kimberlee
    Wuorinen, Alissa
    Inda, Thomas
    Arzbecker, Madeline
    Mueller, Emma
    Huber, Alec
    Pancholi, Harshida
    Blackmore, Murray G.
    Carmona-Alcocer, Vania
    Evans, Jennifer A.
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2023, 120 (18)
  • [3] The circadian clock ticks in plant stress responses
    Xu, Xiaodong
    Yuan, Li
    Xie, Qiguang
    STRESS BIOLOGY, 2022, 2 (01):
  • [4] Synchronization of the Fungal and the Plant Circadian Clock by Light
    Kozma-Bognar, Laszlo
    Kaldi, Krisztina
    CHEMBIOCHEM, 2008, 9 (16) : 2565 - 2573
  • [5] Light induces chromatin modification in cells of the mammalian circadian clock
    Crosio, C
    Cermakian, N
    Allis, CD
    Sassone-Corsi, P
    NATURE NEUROSCIENCE, 2000, 3 (12) : 1241 - 1247
  • [6] Light induces chromatin modification in cells of the mammalian circadian clock
    Claudia Crosio
    Nicolas Cermakian
    C. David Allis
    Paolo Sassone-Corsi
    Nature Neuroscience, 2000, 3 : 1241 - 1247
  • [7] Interactive roles of chromatin regulation and circadian clock function in plants
    Z. Jeffrey Chen
    Paloma Mas
    Genome Biology, 20
  • [8] Interactive roles of chromatin regulation and circadian clock function in plants
    Chen, Z. Jeffrey
    Mas, Paloma
    GENOME BIOLOGY, 2019, 20 (1)
  • [9] Chromatin landscape and circadian dynamics: Spatial and temporal organization of clock transcription
    Aguilar-Arnal, Lorena
    Sassone-Corsi, Paolo
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2015, 112 (22) : 6863 - 6870
  • [10] The Roles of Circadian Clock Genes in Plant Temperature Stress Responses
    Jang, Juna
    Lee, Sora
    Kim, Jeong-Il
    Lee, Sichul
    Kim, Jin A.
    INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2024, 25 (02)