Utilizing DNA metabarcoding to characterize the diet of marine-phase Arctic lamprey (Lethenteron camtschaticum) in the eastern Bering Sea

被引:18
|
作者
Shink, Katie G. [1 ]
Sutton, Trent M. [1 ]
Murphy, James M. [2 ]
Lopez, J. Andres [1 ,3 ]
机构
[1] Univ Alaska Fairbanks, Coll Fisheries & Ocean Sci, 2150 Koyukuk St, Fairbanks, AK 99775 USA
[2] NOAA Fisheries, Ted Stevens Marine Res Inst, Auke Bay Labs, Alaska Fisheries Sci Ctr, 17109 Point Lena Loop Rd, Juneau, AK 99801 USA
[3] Univ Alaska Museum North, 1962 Yukon Dr, Fairbanks, AK 99775 USA
关键词
HERRING CLUPEA-HARENGUS; RIVER LAMPREY; PACIFIC SALMON; LAMPETRA-AYRESI; FRASER-RIVER; PREY DNA; FISH; PARASITISM; DENTITION; ACCURATE;
D O I
10.1139/cjfas-2018-0299
中图分类号
S9 [水产、渔业];
学科分类号
0908 ;
摘要
To understand the marine feeding ecology of Arctic lamprey (Lethenteron camtschaticum) in the eastern Bering Sea, visual observations and DNA metabarcoding of gut contents (N = 250) were used to characterize Arctic lamprey diet composition in 2014 and 2015. Differences among individual diets were evaluated by collection year, capture site, and fish size. Hard structures and tissues were observed during visual examinations of gut contents, and 10 ray-finned fish taxa were identified by DNA metabarcoding. The most frequently observed taxa included capelin (Mallotus villosus), Pacific herring (Clupea pallasii), Pacific sand lance (Ammodytes hexapterus), and gadids. Six taxa were reported for the first time as prey for Arctic lamprey. Individual diets differed between collection years, among capture sites, and among size classes; however, both collection year and size class explained only a small portion of diet variability (R-2 = 0.01 and 0.04, respectively) relative to capture site (R-2 = 0.49). These study results indicate that Arctic lamprey is a flesh-feeding species and highlight the value of DNA metabarcoding to characterize the diet of a poorly understood lamprey species.
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页码:1993 / 2002
页数:10
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