Methanolobus psychrotolerans sp nov., a psychrotolerant methanoarchaeon isolated from a saline meromictic lake in Siberia

被引:5
|
作者
Chen, Sheng-Chung [1 ]
Huang, Hsing-Hua [1 ]
Lai, Mei-Chin [1 ,2 ]
Weng, Chieh-Yin [1 ]
Chiu, Hsiu-Hui [3 ]
Tang, Sen-Lin [3 ]
Rogozin, Denis Yu [4 ,5 ]
Degermendzhy, Andrey G. [4 ,5 ]
机构
[1] Natl Chung Hsing Univ, Dept Life Sci, Taichung, Taiwan
[2] Natl Chung Hsing Univ, Agr Biotechnol Ctr, Taichung, Taiwan
[3] Acad Sinica, Biodivers Res Ctr, Taipei, Taiwan
[4] Russian Acad Sci, Siberian Branch, Inst Biophys, Krasnoyarsk 660036, Russia
[5] Siberian Fed Univ, Krasnoyarsk 660041, Russia
基金
俄罗斯基础研究基金会;
关键词
Archaea; methanogen; Methanolobus; saline meromictic lake; psychrotolerant; Lake Shira; TAIWANENSIS SP NOV; METHYLOTROPHIC METHANOGEN; SEDIMENTS;
D O I
10.1099/ijsem.0.002685
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A psychrotolerant, methylotrophic methanogen, strain YSF-03(T), was isolated from the saline meromictic Lake Shira in Siberia. Cells of strain YSF-03(T) were non-motile, irregular cocci and 0.8-1.2 mu m in diameter. The methanogenic substrates utilized by strain YSF-03(T) were methanol and trimethylamine. The temperature range of growth for strain YSF-03(T) was from 0 to 37 degrees C. The optimum growth conditions were 30-37 degrees C, pH 7.0-7.4 and 0.17M NaCl. The G+C content of the genome of strain YSF-03(T) was 41.3 mol%. Phylogenetic analysis revealed that strain YSF-03(T) was most closely related to Methanolobus profundi MobM(T) (98.15% similarity in 16S rRNA gene sequence). Genome relatedness between strain YSF-03(T) and MobM(T) was computed using the Genome-to-Genome Distance Calculator and average nucleotide identity, which gave values of 23.5 and 79.3 %, respectively. Based on the morphological, phenotypic, phylogenetic and genomic relatedness data presented here, it is evident that strain YSF-03(T) represents a novel species of the genus Methanolobus, for which the name Methanolobus psychrotolerans sp. nov. is proposed. The type strain is YSF-03(T) (= BCRC AR10049(T) = DSM 104044(T) = NBRC 112514(T)).
引用
收藏
页码:1378 / 1383
页数:6
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