Construction of immune-related gene pairs signature to predict the overall survival of osteosarcoma patients

被引:0
|
作者
Li, Long-Qing [1 ]
Zhang, Liang-Hao [2 ]
Zhang, Yan [1 ]
Lu, Xin-Chang [1 ]
Zhang, Yi [1 ]
Liu, Yong-Kui [1 ]
Khader, Manhas Abdul [1 ]
Jia-Wen [1 ]
Tao-Liu [1 ]
Li, Jia-Zhen [1 ]
机构
[1] Zhengzhou Univ, Dept Orthopaed Surg, Affiliated Hosp 1, Zhengzhou, Henan, Peoples R China
[2] Zhengzhou Univ, Dept Urol, Affiliated Hosp 1, Zhengzhou, Henan, Peoples R China
来源
AGING-US | 2020年 / 12卷 / 22期
关键词
immune related gene; tumor immunology; osteosarcoma; TCGA; prognosis; ANGIOPOIETIN-LIKE PROTEIN-2; OPEN-LABEL; TUMOR; CELLS; PROLIFERATION; MACROPHAGES; METASTASIS; EXPRESSION; NIVOLUMAB; IMPACT;
D O I
暂无
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
The purpose of this study is to establish the prognosis of osteosarcoma patients based on the characteristics of immune-related gene pairs. We used the lasso Cox regression model to construct and verify the signature consisting of 14 immune-related gene pairs. This signature can accurately predict the overall survival of osteosarcoma patients and is an independent prognostic factor for osteosarcoma patients. For this we constructed a signature-based nomogram. The results of the nomogram show that our signature can bring clinical net benefits. We then assessed the abundance of infiltrating immune cells in each sample, and combine the results of the gene set enrichment analysis of a single sample to explore the differences in the immune microenvironment between IRPG signature groups. The result of gene set enrichment analysis shows the strong relationship between signature and immune system. Finally, we evaluated the relationship between signature and immunotherapy efficiency using algorithms such as TIMI and SubMap to explore patients who might benefit from immunotherapy. In conclusion, our signature can predict the overall survival rate of osteosarcoma patients and provide potential guidance for exploring patients who may benefit from immunotherapy.
引用
收藏
页码:22906 / 22926
页数:21
相关论文
共 50 条
  • [1] Construction of immune-related gene pairs signature to predict the overall survival of multiple myeloma patients based on whole bone marrow gene expression profiling
    Jafari-Raddani, Farideh
    Davoodi-Moghaddam, Zeinab
    Bashash, Davood
    [J]. MOLECULAR GENETICS AND GENOMICS, 2024, 299 (01)
  • [2] Signature based on metabolic-related gene pairs can predict overall survival of osteosarcoma patients
    Li, Long-Qing
    Zhang, Liang-Hao
    Yuan, Yao-bo
    Lu, Xin-Chang
    Zhang, Yi
    Liu, Yong-Kui
    Wen, Jia
    Khader, Manhas Abdul
    Liu, Tao
    Li, Jia-Zhen
    Zhang, Yan
    [J]. CANCER MEDICINE, 2021, 10 (13): : 4493 - 4509
  • [3] A robust immune-related gene pairs signature for predicting the overall survival of esophageal cancer
    Zheng, Wei
    Fang, Gaofeng
    Huang, Qiao
    Shi, Dan
    Xie, Biao
    [J]. BMC GENOMICS, 2023, 24 (01)
  • [4] A signature of 14 immune-related gene pairs predicts overall survival in gastric cancer
    E. Zhao
    C. Zhou
    S. Chen
    [J]. Clinical and Translational Oncology, 2021, 23 : 265 - 274
  • [5] A robust immune-related gene pairs signature for predicting the overall survival of esophageal cancer
    Wei Zheng
    Gaofeng Fang
    Qiao Huang
    Dan Shi
    Biao Xie
    [J]. BMC Genomics, 24
  • [6] An immune-related gene pairs signature predicts overall survival in serous ovarian carcinoma
    Zhang, Liuyan
    Zhu, Ping
    Tong, Yao
    Wang, Yuzhuo
    Ma, Haifen
    Xia, Xuefei
    Zhou, Yu
    Zhang, Xingguo
    Gao, Feng
    Shu, Peng
    [J]. ONCOTARGETS AND THERAPY, 2019, 12 : 7005 - 7014
  • [7] A signature of 14 immune-related gene pairs predicts overall survival in gastric cancer
    Zhao, E.
    Zhou, C.
    Chen, S.
    [J]. CLINICAL & TRANSLATIONAL ONCOLOGY, 2021, 23 (02): : 265 - 274
  • [8] Construction of an immune-related gene signature for overall survival prediction and immune infiltration in gastric cancer
    Ma, Xiao-Ting
    Liu, Xiu
    Ou, Kai
    Yang, Lin
    [J]. WORLD JOURNAL OF GASTROINTESTINAL ONCOLOGY, 2024, 16 (03)
  • [9] An Immune-Related Gene Pairs Signature for Predicting Survival in Glioblastoma
    Wang, Sheng
    Xu, Xia
    [J]. FRONTIERS IN ONCOLOGY, 2021, 11
  • [10] A novel ferroptosis-related gene signature to predict overall survival in patients with osteosarcoma
    Li, Junqing
    Wu, Feiran
    Xiao, Xing
    Su, Li
    Guo, Xinjun
    Yao, Jie
    Zhu, Huimin
    [J]. AMERICAN JOURNAL OF TRANSLATIONAL RESEARCH, 2022, 14 (09): : 6082 - +