Robustness of Link-Prediction Algorithm Based on Similarity and Application to Biological Networks

被引:14
|
作者
Wang, Liang
Hu, Ke
Tang, Yi [1 ]
机构
[1] Xiangtan Univ, Dept Phys, Minist Educ, Xiangtan 411105, Hunan, Peoples R China
基金
中国国家自然科学基金;
关键词
Biological networks; link-prediction algorithm; link weighting; robustness; COMPLEX NETWORKS; MISSING DATA;
D O I
10.2174/1574893609666140516005740
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Many algorithms have been proposed to predict missing links in a variety of real networks. Emphasis is put on raising both accuracy and efficiency of these algorithms. However, less attention is paid to their robustness against either noise or irrationality of a link which exists in almost all of real networks. In this paper, we investigate the robustness of several typical node-similarity-based algorithms and find that these algorithms are sensitive to the strength of noise. Moreover, we find that it also depends on the structure properties of networks, especially on network efficiency, clustering coefficient and average degree. In addition, we make an attempt to enhance the robustness by using link weighting method to transform un-weighted network into weighted one and then making use of weights of links to characterize their reliability. The result shows that proper link weighting scheme can enhance both robustness and accuracy of these algorithms significantly in biological networks.
引用
收藏
页码:246 / 252
页数:7
相关论文
共 50 条
  • [1] The link-prediction problem for social networks
    Liben-Nowell, David
    Kleinberg, Jon
    JOURNAL OF THE AMERICAN SOCIETY FOR INFORMATION SCIENCE AND TECHNOLOGY, 2007, 58 (07): : 1019 - 1031
  • [2] Deep Link-Prediction Based on the Local Structure of Bipartite Networks
    Lv, Hehe
    Zhang, Bofeng
    Hu, Shengxiang
    Xu, Zhikang
    ENTROPY, 2022, 24 (05)
  • [3] Adversarial Robustness of Similarity-Based Link Prediction
    Zhou, Kai
    Michalak, Tomasz P.
    Vorobeychik, Yevgeniy
    2019 19TH IEEE INTERNATIONAL CONFERENCE ON DATA MINING (ICDM 2019), 2019, : 926 - 935
  • [4] Link-Prediction Enhanced Consensus Clustering for Complex Networks
    Burgess, Matthew
    Adar, Eytan
    Cafarella, Michael
    PLOS ONE, 2016, 11 (05):
  • [5] Node similarity-based graph convolution for link prediction in biological networks
    Coskun, Mustafa
    Koyuturk, Mehmet
    BIOINFORMATICS, 2021, 37 (23) : 4501 - 4508
  • [6] Structural Similarity Based Link Prediction in Social Networks Using Firefly Algorithm
    Srilatha, P.
    Manjula, R.
    PROCEEDINGS OF THE 2017 INTERNATIONAL CONFERENCE ON SMART TECHNOLOGIES FOR SMART NATION (SMARTTECHCON), 2017, : 560 - 564
  • [7] Node Similarity Measurement and Link Prediction Algorithm in Temporal Networks
    Chen D.-M.
    Yuan Z.-Z.
    Huang X.-Y.
    Wang D.-Q.
    Wang, Dong-Qi (wangdq@swc.neu.edu.cn), 1600, Northeast University (41): : 29 - 34and43
  • [8] Association of the PageRank algorithm with similarity-based methods for link prediction in complex networks
    Charikhi, Mourad
    PHYSICA A-STATISTICAL MECHANICS AND ITS APPLICATIONS, 2024, 637
  • [9] Link prediction in multiplex networks based on interlayer similarity
    Najari, Shaghayegh
    Salehi, Mostafa
    Ranjbar, Vahid
    Jalili, Mandi
    PHYSICA A-STATISTICAL MECHANICS AND ITS APPLICATIONS, 2019, 536
  • [10] A Similarity Index Algorithm for Link Prediction
    Xu, Min
    Yin, Yongchao
    2017 12TH INTERNATIONAL CONFERENCE ON INTELLIGENT SYSTEMS AND KNOWLEDGE ENGINEERING (IEEE ISKE), 2017,