Local height in weighted Dyck models of random walks and the variability of the number of coalescent histories for caterpillar-shaped gene trees and species trees

被引:5
|
作者
Disanto, Filippo [1 ]
Munarini, Emanuele [2 ]
机构
[1] Univ Pisa, Dept Math, I-56126 Pisa, Italy
[2] Politecn Milan, Dept Math, I-20133 Milan, Italy
关键词
Lattice walks; Weighted Dyck paths; Combinatorial enumeration; Computational biology; PATHS;
D O I
10.1007/s42452-019-0564-7
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
We examine combinatorial parameters of three models of random lattice walks with up and down steps. In particular, we study the height y(i) measured after i up-steps in a random weighted Dyck path of size (semilength) n. For a fixed integer w is an element of {0, 1, 2}, the considered weighting scheme assigns to each Dyck path of size n a weight. Pi(n)(i=1) y(i)(w) that depends on the height of the up-steps of the path. We investigate the expected value E-n(y(i)) of the height y(i) in a random weighted Dyck path of size n, providing exact formulas for E-n(y(i)) and E-n(y(i)(2)) when w = 0, 1, and estimates of the mean of y(i) for w = 2. Denoting by i*(n) the position i where E-n(y(i)) reaches its maximum m(n), our calculations indicate that, when n becomes large, the pair (i*(n), m(n)) grows like (n/2, 2 root n/pi) if w = 0, (3n/4, n/2) if w = 1, and ((9 + root 17)n/16, (1 + root 17)n/8) if w = 2. These results also contribute to the study of the variability of the number of "coalescent histories": structures used in models of gene tree evolution to encode the combinatorially different configurations of a gene tree topology along the branches of a species tree. Relationships with other combinatorial and algebraic structures, such as alternating permutations and Meixner polynomials, are also discussed.
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页数:19
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