Dynamic Disorder-Driven Substrate Inhibition and Bistability in a Simple Enzymatic Reaction

被引:11
|
作者
Chaudhury, Srabanti [1 ]
Igoshin, Oleg A. [1 ]
机构
[1] Rice Univ, Dept Bioengn, Houston, TX 77005 USA
来源
JOURNAL OF PHYSICAL CHEMISTRY B | 2009年 / 113卷 / 40期
关键词
SINGLE-MOLECULE KINETICS; CONFORMATIONAL DYNAMICS; REACTION SYSTEM; CATALYSIS; PROTEIN; OSCILLATIONS; TRANSITIONS; HYSTERESIS; BINDING; MODEL;
D O I
10.1021/jp907908d
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Conformations and catalytic rates of enzymes (biological catalysts) fluctuate over a wide range of time scales. Recent experimental and theoretical investigations demonstrated case studies where the enzymatic catalysis rate follows the Michaelis-Menten (MM) rate law despite molecular fluctuations. In this paper, we investigate deviations from MM law and their effects oil the dynamical behavior of the enzymatic network. We consider a simple kinetic scheme for a single substrate enzymatic reaction in which the product release step is treated explicitly. We examine how conformational fluctuations affect the underlying rate law ill the quasi-static limit when conformational dynamics is very slow in one of the states. Our numerical results and analytically solvable model indicate that slow conformational fluctuations of the enzyme substrate complex lead to non-MM behavior, substrate inhibition, and possible bistability of the reaction network.
引用
收藏
页码:13421 / 13428
页数:8
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