Comparative interactomes of SIRT6 and SIRT7: Implication of functional links to aging

被引:66
|
作者
Lee, Namgyu [1 ]
Kim, Dae-Kyum [1 ]
Kim, Eung-Sam [2 ,3 ]
Park, Sung Jin [1 ]
Kwon, Jung-Hee [4 ]
Shin, Jihye [1 ]
Park, Seon-Min [5 ]
Moon, Young Ho [4 ]
Wang, Hee Jung [6 ]
Gho, Yong Song [1 ]
Choi, Kwan Yong [1 ,7 ]
机构
[1] Pohang Univ Sci & Technol, Dept Life Sci, Pohang 790784, Gyeongbuk, South Korea
[2] Chonnam Natl Univ, Dept Biol Sci, Kwangju, South Korea
[3] Univ Washington, Dept Bioengn, Seattle, WA 98195 USA
[4] CbsBioscience Inc, Taejon, South Korea
[5] Pohang Ctr Evaluat Biomat, Pohang, Gyeongbuk, South Korea
[6] Ajou Univ, Dept Surg, Sch Med, Suwon 441749, South Korea
[7] Dept Integrat Biosci & Biotechnol, Pohang, Gyeongbuk, South Korea
关键词
Aging; Cell biology; ESI-MS/MS; Interaction profiling; DNA-REPAIR; GENOMIC INSTABILITY; PROTEOMIC ANALYSIS; INDUCED SENESCENCE; SAMPLE PREPARATION; ACETYLOME ANALYSIS; CELL-SURVIVAL; STRESS; LOCALIZATION; CHROMATIN;
D O I
10.1002/pmic.201400001
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Sirtuins are NAD(+)-dependent deacetylases that regulate a range of cellular processes. Although diverse functions of sirtuins have been proposed, those functions of SIRT6 and SIRT7 that are mediated by their interacting proteins remain elusive. In the present study, we identified SIRT6- and SIRT7-interacting proteins, and compared their interactomes to investigate functional links. Our interactomes revealed 136 interacting proteins for SIRT6 and 233 for SIRT7 while confirming seven and 111 proteins identified previously for SIRT6 and SIRT7, respectively. Comparison of SIRT6 and SIRT7 interactomes under the same experimental conditions disclosed 111 shared proteins, implying related functional links. The interaction networks of interactomes indicated biological processes associated with DNA repair, chromatin assembly, and aging. Interactions of two highly acetylated proteins, nucleophosmin (NPM1) and nucleolin, with SIRT6 and SIRT7 were confirmed by co-immunoprecipitation. NPM1 was found to be deacetylated by both SIRT6 and SIRT7. In senescent cells, the acetylation level of NPM1 was increased in conjunction with decreased levels of SIRT6 and SIRT7, suggesting that the acetylation of NPM1 could be regulated by SIRT6 and SIRT7 in the aging process. Our comparative interactomic study of SIRT6 and SIRT7 implies important functional links to aging by their associations with interacting proteins. All MS data have been deposited in the ProteomeXchange with identifiers PXD000159 and PXD000850 (http://proteomecentral.proteomexchange.org/dataset/PXD000159, http://proteomecentral.proteomexchange.org/dataset/PXD000850).
引用
收藏
页码:1610 / 1622
页数:13
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