Regularized Estimation for the Accelerated Failure Time Model

被引:72
|
作者
Cai, T. [1 ]
Huang, J. [2 ]
Tian, L. [2 ]
机构
[1] Harvard Univ, Dept Biostat, Boston, MA 02115 USA
[2] Northwestern Univ, Dept Prevent Med, Chicago, IL 60611 USA
基金
美国国家卫生研究院;
关键词
AFT model; LASSO regularization; Linear programming; GENE-EXPRESSION SIGNATURE; PARTIAL LEAST-SQUARES; VARIABLE SELECTION; REGRESSION SHRINKAGE; LINEAR-REGRESSION; ADAPTIVE LASSO; SURVIVAL; PATH;
D O I
10.1111/j.1541-0420.2008.01074.x
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
In the presence of high-dimensional predictors, it is challenging to develop reliable regression models that can be used to accurately predict future outcomes. Further complications arise when the outcome of interest is an event time, which is often not fully observed due to censoring. In this article, we develop robust prediction models for event time outcomes by regularizing the Gehan's estimator for the accelerated failure time (AFT) model (Tsiatis, 1996, Annals of Statistics 18, 305-328) with least absolute shrinkage and selection operator (LASSO) penalty. Unlike existing methods based on the inverse probability weighting and the Buckley and James estimator (Buckley and James, 1979, Biometrika 66, 429-436), the proposed approach does not require additional assumptions about the censoring and always yields a solution that is convergent. Furthermore, the proposed estimator leads to a stable regression model for prediction even if the AFT model fails to hold. To facilitate the adaptive selection of the tuning parameter, we detail an efficient numerical algorithm for obtaining the entire regularization path. The proposed procedures are applied to a breast cancer dataset to derive a reliable regression model for predicting patient survival based on a set of clinical prognostic factors and gene signatures. Finite sample performances of the procedures are evaluated through a simulation study.
引用
收藏
页码:394 / 404
页数:11
相关论文
共 50 条
  • [1] Regularized estimation in the accelerated failure time model with high-dimensional covariates
    Huang, Jian
    Ma, Shuangge
    Xie, Huiliang
    [J]. BIOMETRICS, 2006, 62 (03) : 813 - 820
  • [2] Adjusted regularized estimation in the accelerated failure time model with high dimensional covariates
    Hu, Jianwei
    Chai, Hao
    [J]. JOURNAL OF MULTIVARIATE ANALYSIS, 2013, 122 : 96 - 114
  • [3] Efficient estimation for the accelerated failure time model
    Zeng, Donglin
    Lin, D. Y.
    [J]. JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION, 2007, 102 (480) : 1387 - 1396
  • [4] Pretest and shrinkage estimation strategies in accelerated failure time model
    Forzley, Quinn
    Hossain, Shakhawat
    [J]. JOURNAL OF STATISTICAL COMPUTATION AND SIMULATION, 2022, 92 (07) : 1512 - 1529
  • [5] Robust estimation and variable selection for the accelerated failure time model
    Li, Yi
    Liang, Muxuan
    Mao, Lu
    Wang, Sijian
    [J]. STATISTICS IN MEDICINE, 2021, 40 (20) : 4473 - 4491
  • [6] Least absolute deviations estimation for the accelerated failure time model
    Huang, Jian
    Ma, Shuangge
    Xie, Huiliang
    [J]. STATISTICA SINICA, 2007, 17 (04) : 1533 - 1548
  • [7] Sparsity-restricted estimation for the accelerated failure time model
    Zhang, Xiaoyu
    Zhou, Yunpeng
    Xu, Jinfeng
    Yuen, Kam Chuen
    [J]. STATISTICS AND ITS INTERFACE, 2022, 15 (01) : 1 - 18
  • [8] EFFICIENT ESTIMATION FOR AN ACCELERATED FAILURE TIME MODEL WITH A CURE FRACTION
    Lu, Wenbin
    [J]. STATISTICA SINICA, 2010, 20 (02) : 661 - 674
  • [9] Generalized M-estimation for the accelerated failure time model
    Wang, Siyang
    Hu, Tao
    Xiang, Liming
    Cui, Hengjian
    [J]. STATISTICS, 2016, 50 (01) : 114 - 138
  • [10] An alternative estimation method for the accelerated failure time frailty model
    Zhang, Jiajia
    Peng, Yingwei
    [J]. COMPUTATIONAL STATISTICS & DATA ANALYSIS, 2007, 51 (09) : 4413 - 4423