Identification of Potential Vaccine Candidates Against Streptococcus pneumoniae by Reverse Vaccinology Approach

被引:29
|
作者
Talukdar, Sandipan [1 ]
Zutshi, Shubhranshu [2 ]
Prashanth, K. S. [2 ]
Saikia, Kandarpa K. [1 ]
Kumar, Parveen [3 ]
机构
[1] Gauhati Univ, IST, Dept Biotechnol & Bioengn, Gauhati 781014, Assam, India
[2] Gauhati Med Coll, Natl Inst Pharmaceut Educ & Res, Dept Biotechnol, Gauhati 781032, Assam, India
[3] Gauhati Med Coll, Natl Inst Pharmaceut Educ & Res, Dept Pharmacol & Toxicol, Lab Mol Pharmacol & Toxicol, Gauhati 781032, Assam, India
关键词
S; pneumoniae; Antigens; Immunogenic; pavB; Pullulanase; Vaccine; SUBCELLULAR-LOCALIZATION PREDICTION; DATABASE RESOURCES; FUSION CLASSIFIER; SEQUENCE-ANALYSIS; NATIONAL CENTER; PROTEIN; SURFACE; VIRULENCE; BINDING; PULLULANASE;
D O I
10.1007/s12010-014-0749-x
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
In the past few decades, genome-based approaches have contributed significantly to vaccine development. Our aim was to identify the most conserved and immunogenic antigens of Streptococcus pneumoniae, which can be potential vaccine candidates in the future. BLASTn was done to identify the most conserved antigens. PSORTb 3.0.2 was run to predict the subcellular localization of the proteins. B cell epitope prediction was done for the immunogenicity testing. Finally, BLASTp was done for verifying the extent of similarity to human proteome to exclude the possibility of autoimmunity. Proteins failing to comply with the set parameters were filtered at each step. Based on the above criteria, out of the initial 22 pneumococcal proteins selected for screening, pavB and pullulanase were the most promising candidate proteins.
引用
收藏
页码:3026 / 3041
页数:16
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