The complete mitochondrial genome of Sebastes pachycephalus (Scorpaenidae, Scorpaeniformes) from the East Sea, Korea

被引:7
|
作者
Jang, Yo-Soon [1 ,2 ]
Park, Kwang-Jae [3 ]
Kim, Ki-Yong [4 ]
Kim, Sung [5 ,6 ]
机构
[1] Korea Inst Ocean Sci & Technol, East Sea Environm Res Div, Gyeongbuk, South Korea
[2] Univ Sci & Technol, Dept Marine Biotechnol, Taejon, South Korea
[3] Natl Fisheries Res & Dev Inst, Tidal Flat Res Inst, Kunsan, South Korea
[4] Rural Dev Adm, Natl Inst Anim Sci, Chungnam, South Korea
[5] Univ Sci & Technol, Dept Marine Biol, Taejon, South Korea
[6] Korea Inst Ocean Sci & Technol, Marine Ecosyst Res Div, Ansan 426744, South Korea
关键词
Mitochondrial genome; rockfish; Sebastes pachycephalus; Sebastinae;
D O I
10.3109/19401736.2013.873904
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Due to variations in coloration as well as other morphological features, the identification of Sebastes pachycephalus has been problematic. The complete mitogenome of S. pachycephalus was acquired using next-generation sequencing. The full genome was 16,415 base pairs (bp) in length, assembling two rRNAs, 22 tRNAs, one control region and 13 protein-coding genes (PCGs). The genome constitutes 27.9% A, 26.3% T, 17.2% G and 28.5% C, showing a slight AT bias (54.2%). All PCGs start with an ATG initial codon except COX1, which contains GTG. Most PCG stop codons were TAA, except for ND1 and ND3 (TAG) and Cytb (incomplete termination codon, T). All tRNAs showed the typical cloverleaf structure, except tRNA(Ser(AGY)), which lacks the DHU arm. The complete mitogenome of S. pachycephalus will help further identification and speciation analyses.
引用
收藏
页码:69 / 70
页数:2
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