TEXT MINING FROM BIOMEDICAL DOMAIN USING A FULL PARSER

被引:0
|
作者
Govindarajan, Priya [1 ]
Ravichandran, K. S. [2 ]
机构
[1] Sastra Univ, Kumbakonam, India
[2] Sastra Univ, Ict, Thanjavur, India
关键词
Text mining; Full parser; Extraction; Analyzing; Biomedical domain; Preprocessor; Structured data; Argument structure;
D O I
暂无
中图分类号
TP39 [计算机的应用];
学科分类号
081203 ; 0835 ;
摘要
Text mining is vital for knowledge cultivation, keeping this in perspective we have focused on developing a system which uses a full parser for analyzing the text, grammar towards the biomedical arena. We proposed a preprocessor to overcome the shortcomings of full parsing and modules to handle the partial outcome. The developed system, not only has the viability to be maintained easily, but also can adapt itself for a particular domain. In the primary experiment, out of 131 argument structures extracted from 96 sentences, 32 were extractable, 33 with ambiguity and the remaining 66 (non-extractable) for which partial result was determined. The work produced better result than the other full parser with reduced count of failure in extraction and ambiguity.
引用
收藏
页码:522 / 530
页数:9
相关论文
共 50 条
  • [1] Application of text mining in the biomedical domain
    Fleuren, Wilco W. M.
    Alkema, Wynand
    METHODS, 2015, 74 : 97 - 106
  • [2] Efficient Retrieval of Text for Biomedical Domain using Data Mining Algorithm
    Vashishta, Sumit
    Jain, Yogendra Kumar
    INTERNATIONAL JOURNAL OF ADVANCED COMPUTER SCIENCE AND APPLICATIONS, 2011, 2 (04) : 77 - 80
  • [3] Biomedical text mining algorithm based on domain ontology
    Jiang, Xiaoling
    Zhang, Hui
    Xu, Jiaming
    Wu, Weicheng
    Mo, Xun
    INTERNATIONAL JOURNAL OF DATA MINING AND BIOINFORMATICS, 2022, 27 (1-3) : 187 - 200
  • [4] GTP (General Text Parser) software for text mining
    Giles, JT
    Wo, L
    Berry, MW
    STATISTICAL DATA MINING AND KNOWLEDGE DISCOVERY, 2004, : 455 - 471
  • [5] A Text-Mining System for Concept Annotation in Biomedical Full Text Articles
    Wei, Chih-Hsuan
    Allot, Alexis
    Leaman, Robert
    Lu, Zhiyong
    ACM-BCB'19: PROCEEDINGS OF THE 10TH ACM INTERNATIONAL CONFERENCE ON BIOINFORMATICS, COMPUTATIONAL BIOLOGY AND HEALTH INFORMATICS, 2019, : 540 - 540
  • [6] An Initial Study of Full Parsing of Clinical Text using the Stanford Parser
    Xu, Hua
    AbdelRahman, Samir
    Jiang, Min
    Fan, Jung-wei
    Huang, Yang
    2011 IEEE INTERNATIONAL CONFERENCE ON BIOINFORMATICS AND BIOMEDICINE WORKSHOPS, 2011, : 607 - 614
  • [7] Analysis of protein/protein interactions through biomedical literature: Text mining of abstracts vs. text mining of full text articles
    Martin, EPG
    Bremer, EG
    Guerin, MC
    DeSesa, C
    Jouve, O
    KNOWLEDGE EXPLORATION IN LIFE SCIENCE INFORMATICS, PROCEEDINGS, 2004, 3303 : 96 - 108
  • [8] Biomedical Text Mining Using a Grid Computing Approach
    Castellano, Marcello
    Mastronardi, Giuseppe
    Decataldo, Giacinto
    Pisciotta, Luca
    Tarricone, Gianfranco
    Cariello, Lucia
    Bevilacqua, Vitoantonio
    ADVANCED INTELLIGENT COMPUTING THEORIES AND APPLICATIONS, PROCEEDINGS: WITH ASPECTS OF ARTIFICIAL INTELLIGENCE, 2008, 5227 : 1077 - 1084
  • [9] Porting a lexicalized-grammar parser to the biomedical domain
    Rimell, Laura
    Clark, Stephen
    JOURNAL OF BIOMEDICAL INFORMATICS, 2009, 42 (05) : 852 - 865
  • [10] Text mining the biomedical literature
    Pertsemlidis, A
    BIOPHYSICAL JOURNAL, 2002, 82 (01) : 168A - 168A