Genome-wide identification and characterization of Lectin receptor-like kinase (LecRLK) genes in mungbean (Vigna radiata L. Wilczek)

被引:9
|
作者
Singh, Poornima [1 ]
Mishra, Awdhesh Kumar [2 ]
Singh, Chandra Mohan [3 ]
机构
[1] Mahatma Gandhi Cent Univ, Sch Life Sci, Dept Biotechnol, Motihari 845401, Bihar, India
[2] Yeungnam Univ, Dept Biotechnol, Gyongsan 38541, South Korea
[3] Banda Univ Agr & Technol, Coll Agr, Dept Genet & Plant Breeding, Banda 210001, Uttar Pradesh, India
关键词
Exon; GO analysis; Kinase domain; Lectin RLK; Mungbean; S-LOCUS; NICOTIANA-BENTHAMIANA; ARABIDOPSIS; EXPRESSION; PROTEIN; FAMILY; RESISTANCE; DROUGHT; CLASSIFICATION; TOLERANCE;
D O I
10.1007/s13353-021-00613-8
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Lectins are a diverse group of proteins found throughout plant species. Numerous lectins are involved in many important processes such as organogenesis, defense mechanism, signaling, and stress response. Although the mungbean whole genome sequence has been published, distribution, diversification, and gene structure of lectin genes in mungbean are still unknown. A total of 73 putative lectin genes with kinase domain have been identified through BLAST and HMM profiling. Furthermore, these sequences could be classified into three families, such as G-type, L-type, and C-type VrLecRLKs. 59 out of 73 VrLecRLKs were distributed on to 11 chromosomes, whereas rest could not be anchored onto any specific chromosome. Gene structure analysis revealed a varying number of exons in 73 VrLecRLK genes. Gene ontology annotations were grouped into three categories like biological processes, cellular components and molecular functions, which were associated with signaling pathways, defense responses, transferase activity, binding activity, and kinase activity. The comprehensive and systematic studies of LecRLK genes family provides a reference and foundation for further functional analysis of VrLecRLK genes in mungbean.
引用
收藏
页码:223 / 234
页数:12
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