Neobacillus rhizosphaerae sp. nov., isolated from the rhizosphere, and reclassification of Bacillus dielmonensis as Neobacillus dielmonensis comb. nov.

被引:1
|
作者
Kaempfer, Peter [1 ]
Glaeser, Stefanie P. [1 ]
McInroy, John A. [2 ]
Clermont, Dominique [3 ]
Lipski, Andre [4 ]
Criscuolo, Alexis [5 ]
机构
[1] Justus Liebig Univ Giessen, Inst Angew Mikrobiol, Giessen, Germany
[2] Auburn Univ, Dept Entomol & Plant Pathol, Auburn, AL 36849 USA
[3] Univ Paris, Inst Pasteur, CIP Collect Inst Pasteur, F-75015 Paris, France
[4] Rhein Friedrich Wilhelms Univ Bonn, Inst Ernahrungs & Lebensmittelwissensch Lebensmit, Bonn, Germany
[5] Univ Paris, Inst Pasteur, Bioinformat & Biostat Hub, F-75015 Paris, France
关键词
Bacillaceae; Neobacillus; new species; polyphasic taxonomy; root isolate; RIBOSOMAL-RNA GENE; GENOME SEQUENCE; SOIL; IDENTIFICATION; BACTERIA; ROOT;
D O I
10.1099/ijsem.0.005636
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A Gram- stain-positive, facultative anaerobic endospore-forming bacterium, which originated from roots/rhizosphere of maize (Zea mays), was investigated for its taxonomic position. On the basis of 16S rRNA gene sequence similarities, strain JJ- 3T was grouped together with Neobacillus species showing the highest similarities to Neobacillus bataviensis (98.8 %) and the three species Neobacillus dendrensis, Neobacillus soli and Neobacillus cucumis (all 98.6 %). The 16S rRNA gene sequence similari-ties to the sequences of the type strains of other Neobacillus species were lower than 98.5 %. The average nucleotide identity, average amino acid identity and digital DNA-DNA hybridization values between the JJ- 3T genome assembly and those of the other Neobacillus type strains were <83, <85 and <27 %, respectively. Chemotaxonomic features supported the grouping of the strain to the genus Neobacillus, e.g. the major fatty acids were C15: 0 anteiso and C15: 0 iso, the polar lipid profile contained the major components diphosphatidylglycerol, phosphatidylglycerol and phosphatidylethanolamine, and the major quinone was menaquinone MK -7. Physiological and biochemical test results were slightly different from those of the most closely related species. For this reason, JJ- 3T represents a novel species of the genus Neobacillus, for which we propose the name Neobacillus rhizosphaerae sp. nov., with JJ- 3T (= CIP 111895T=LMG 32087T=DSM 111784T=CCM 9084T) as the type strain. We also propose to reclassify Bacillus dielmonensis as Neobacillus dielmonensis comb. nov. based mainly on the results of phylogenomic and conserved signature indel analyses.
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页数:9
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