Identification and Application of a Novel Immune-Related lncRNA Signature on the Prognosis and Immunotherapy for Lung Adenocarcinoma

被引:5
|
作者
Zeng, Zhimin [1 ,2 ]
Liang, Yuxia [1 ,2 ]
Shi, Jia [1 ,2 ]
Xiao, Lisha [1 ,2 ]
Tang, Lu [1 ,2 ]
Guo, Yubiao [1 ,2 ]
Chen, Fengjia [1 ,2 ]
Lin, Gengpeng [1 ,2 ]
机构
[1] Sun Yat Sen Univ, Affiliated Hosp 1, Div Pulm & Crit Care Med, Zhongshan Second Rd 58, Guangzhou 510080, Peoples R China
[2] Sun Yat Sen Univ, Inst Pulm Dis, Guangzhou 510275, Peoples R China
基金
中国国家自然科学基金;
关键词
immune-related lncRNA; ddPCR; prognosis; immunotherapy; lung adenocarcinoma; EXPRESSION; MICROENVIRONMENT; THERAPY; CELLS; SET;
D O I
10.3390/diagnostics12112891
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
Background: Long non-coding RNA (lncRNA) participates in the immune regulation of lung cancer. However, limited studies showed the potential roles of immune-related lncRNAs (IRLs) in predicting survival and immunotherapy response of lung adenocarcinoma (LUAD). Methods: Based on The Cancer Genome Atlas (TCGA) and ImmLnc databases, IRLs were identified through weighted gene coexpression network analysis (WGCNA), Cox regression, and Lasso regression analyses. The predictive ability was validated by Kaplan-Meier (KM) and receiver operating characteristic (ROC) curves in the internal dataset, external dataset, and clinical study. The immunophenoscore (IPS)-PD1/PD-L1 blocker and IPS-CTLA4 blocker data of LUAD were obtained in TCIA to predict the response to immune checkpoint inhibitors (ICIs). The expression levels of immune checkpoint molecules and markers for hyperprogressive disease were analyzed. Results: A six-IRL signature was identified, and patients were stratified into high- and low-risk groups. The low-risk had improved survival outcome (p = 0.006 in the training dataset, p = 0.010 in the testing dataset, p < 0.001 in the entire dataset), a stronger response to ICI (p < 0.001 in response to anti-PD-1/PD-L1, p < 0.001 in response to anti-CTLA4), and higher expression levels of immune checkpoint molecules (p < 0.001 in PD-1, p < 0.001 in PD-L1, p < 0.001 in CTLA4) but expressed more biomarkers of hyperprogression in immunotherapy (p = 0.002 in MDM2, p < 0.001 in MDM4). Conclusion: The six-IRL signature exhibits a promising prediction value of clinical prognosis and ICI efficacy in LUAD. Patients with low risk might gain benefits from ICI, although some have a risk of hyperprogressive disease.
引用
收藏
页数:14
相关论文
共 50 条
  • [1] Prediction of prognosis and immunotherapy response with a robust immune-related lncRNA pair signature in lung adenocarcinoma
    Cao, Kui
    Liu, Mingdong
    Ma, Keru
    Jiang, Xiangyu
    Ma, Jianqun
    Zhu, Jinhong
    [J]. CANCER IMMUNOLOGY IMMUNOTHERAPY, 2022, 71 (06) : 1295 - 1311
  • [2] Prediction of prognosis and immunotherapy response with a robust immune-related lncRNA pair signature in lung adenocarcinoma
    Kui Cao
    Mingdong Liu
    Keru Ma
    Xiangyu Jiang
    Jianqun Ma
    Jinhong Zhu
    [J]. Cancer Immunology, Immunotherapy, 2022, 71 : 1295 - 1311
  • [3] Identification and Validation of a Novel Immune-Related Four-lncRNA Signature for Lung Adenocarcinoma
    Wang, Jixin
    Yin, Xiangjun
    Zhang, Yin-Qiang
    Ji, Xuming
    [J]. FRONTIERS IN GENETICS, 2021, 12
  • [4] An immune-related lncRNA signature for the prognosis of pancreatic adenocarcinoma
    Qi, Bing
    Liu, Han
    Zhou, Qi
    Ji, Li
    Shi, Xueying
    Wei, Yushan
    Gu, Yajun
    Mizushima, Akio
    Xia, Shilin
    [J]. AGING-US, 2021, 13 (14): : 18806 - 18826
  • [5] Identification and Validation of Immune-Related LncRNA Prognostic Signature for Lung Adenocarcinoma
    Wu, Guomin
    Wang, Qihao
    Zhu, Ting
    Fu, Linhai
    Li, Zhupeng
    Wu, Yuanlin
    Zhang, Chu
    [J]. FRONTIERS IN GENETICS, 2021, 12
  • [6] A novel prognostic signature of immune-related lncRNA pairs in lung adenocarcinoma
    Yang Liu
    Qiuhong Wu
    Xuejiao Fan
    Wen Li
    Xiaogang Li
    Hui Zhu
    Qinghua Zhou
    Jinming Yu
    [J]. Scientific Reports, 11
  • [7] A novel prognostic signature of immune-related lncRNA pairs in lung adenocarcinoma
    Liu, Yang
    Wu, Qiuhong
    Fan, Xuejiao
    Li, Wen
    Li, Xiaogang
    Zhu, Hui
    Zhou, Qinghua
    Yu, Jinming
    [J]. SCIENTIFIC REPORTS, 2021, 11 (01)
  • [8] A Novel Immune-Related Gene Signature Predicts Prognosis of Lung Adenocarcinoma
    Ma, Chao
    Li, Feng
    Wang, Ziming
    Luo, Huan
    [J]. BIOMED RESEARCH INTERNATIONAL, 2022, 2022
  • [9] Immune-related eight-lncRNA signature for improving prognosis prediction of lung adenocarcinoma
    Chen, Yan
    Zhang, Xiuxiu
    Li, Jinze
    Zhou, Min
    [J]. JOURNAL OF CLINICAL LABORATORY ANALYSIS, 2021, 35 (11)
  • [10] Cuproptosis and Immune-Related Gene Signature Predicts Immunotherapy Response and Prognosis in Lung Adenocarcinoma
    Sun, Zihao
    Chen, Xiujing
    Huang, Xiaoning
    Wu, Yanfen
    Shao, Lijuan
    Zhou, Suna
    Zheng, Zhu
    Lin, Yiguang
    Chen, Size
    [J]. LIFE-BASEL, 2023, 13 (07):