Spatial pattern formation in microtubule post-translational modifications and the tight localization of motor-driven cargo

被引:5
|
作者
Iniguez, Abdon [2 ]
Allard, Jun [1 ,2 ]
机构
[1] Univ Calif Irvine, Dept Math & Phys & Astron, Ctr Complex Biol Syst, Irvine, CA 92617 USA
[2] Univ Calif Irvine, Ctr Complex Biol Syst, Irvine, CA 92617 USA
关键词
Pattern formation; First passage time; Microtubules; Kinesin; Dynein; De-tyrosination; BIDIRECTIONAL TRANSPORT; DYNAMIC INSTABILITY; SELF-ORGANIZATION; CELL POLARITY; MODEL; GROWTH;
D O I
10.1007/s00285-016-1053-x
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Microtubule (MT) "age" can be interpreted as nucleotide state, lattice defects, or post-translational modification (PTM) such as acetylation and detyrosination. In all three cases, these have been recently shown to have functionally-important effects on the dynamics of MT arrays, and can present spatial and temporal heterogeneity. While mathematical models for MT array densities are well-established, here we present equations describing MT age, defined as the mean time since the MT's building blocks (tubulin) were polymerized from their soluble dimer state. We derive the age equations using a mean first-passage time calculation and two complementary approaches: The continuum limit of spatial discretization model, and an adjoint operator approach. These equations can recapitulate the observation that the oldest (most de-tyrosinated) tubulin in axons is near the middle of axons during neuronal development in chick embryos. Furthermore, PTMs influence motor kinetics up to approximately twofold for off-rates and velocities. Our simulations demonstrate that this relatively weak dependence of motor kinetics is sufficient to target motor cargo to a specific location along the array. This localization is tightly peaked in a way that magnifies the relatively small signal of PTM spatial heterogeneity. Thus, MT age can produce long-range spatial patterning without feedbacks or diffusing signals.
引用
收藏
页码:1059 / 1080
页数:22
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