A 3D graphical representation of RNA secondary structures

被引：58
|
作者：
Liao, B [1 ]
Wang, TM [1 ]
机构：
[1] Dalian Univ Technol, Dept Appl Math, Dalian 116024, Peoples R China
来源：
JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS | 2004年 / 21卷 / 06期
关键词：
RNA secondary structure; similarity; virus; 3D graphical representation;
D O I：
10.1080/07391102.2004.10506972
中图分类号：
Q5 [生物化学]; Q7 [分子生物学];
学科分类号：
071010 ; 081704 ;
摘要：
In this paper, we proposed a 3-D graphical representation of RNA secondary structures. Based on this representation, we outline an approach by constructing a 3-component vector whose components are the normalized leading eigenvalues of the L/L matrices associated with RNA secondary structure. The examination of similarities/dissimilarities among the secondary structure at the 3'-terminus of different viruses illustrates the utility of the approach.
引用
收藏
页码：827 / 832
页数：6
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