Taxonomic composition and seasonal dynamics of the air microbiome in West Siberia

被引:12
|
作者
Gusareva, Elena S. [1 ]
Gaultier, Nicolas P. E. [1 ]
Premkrishnan, Balakrishnan N., V [1 ]
Kee, Carmon [1 ]
Lim, Serene Boon Yuean [1 ]
Heinle, Cassie E. [1 ]
Purbojati, Rikky W. [1 ]
Nee, Ang Poh [1 ]
Lohar, Sachin R. [1 ]
Yanqing, Koh [1 ]
Kharkov, Vladimir N. [2 ]
Drautz-Moses, Daniela, I [1 ]
Stepanov, Vadim A. [2 ]
Schuster, Stephan C. [1 ]
机构
[1] Nanyang Technol Univ, Singapore Ctr Environm Life Sci Engn SCELSE, 60 Nanyang Dr, Singapore 637551, Singapore
[2] Russian Acad Sci, Tomsk Natl Res Med Ctr, Res Inst Med Genet, Tomsk 634050, Russia
关键词
BACTERIAL;
D O I
10.1038/s41598-020-78604-8
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Here, we describe taxonomical composition, as well as seasonal and diel dynamics of airborne microbial communities in West Siberia. A total of 78 airborne biomass samples from 39 time intervals were analysed, within a temperature range of 48 degrees C (26 degrees C to -22 degrees C). We observed a 5-170-fold decrease in DNA yield extracted from the airborne biomass in winter compared to summer, nevertheless, yielding sufficient material for metagenomic analysis. The airborne microbial communities included Actinobacteria and Proteobacteria, Ascomycota and Basidiomycota fungi as major components, as well as some Streptophyta plants. In summer, bacterial and fungal plant pathogens, and wood-rotting saprophytes were predominant. In winter, Ascomycota moulds and cold-related or stress environment bacterial species were enriched, while the fraction of wood-rotting and mushroom-forming Basidiomycota fungi was largely reduced. As recently reported for the tropical climate, the airborne microbial communities performed a diel cycle in summer, however, in winter diel dynamics were not observed.
引用
收藏
页数:7
相关论文
共 50 条
  • [1] Taxonomic composition and seasonal dynamics of the air microbiome in West Siberia
    Elena S. Gusareva
    Nicolas P. E. Gaultier
    Balakrishnan N. V. Premkrishnan
    Carmon Kee
    Serene Boon Yuean Lim
    Cassie E. Heinle
    Rikky W. Purbojati
    Ang Poh Nee
    Sachin R. Lohar
    Koh Yanqing
    Vladimir N. Kharkov
    Daniela I. Drautz-Moses
    Vadim A. Stepanov
    Stephan C. Schuster
    Scientific Reports, 10
  • [2] Composition and Dynamics of the Activated Sludge Microbiome during Seasonal Nitrification Failure
    Juliet Johnston
    Timothy LaPara
    Sebastian Behrens
    Scientific Reports, 9
  • [3] Composition and Dynamics of the Activated Sludge Microbiome during Seasonal Nitrification Failure
    Johnston, Juliet
    LaPara, Timothy
    Behrens, Sebastian
    SCIENTIFIC REPORTS, 2019, 9 (1)
  • [4] Taxonomic composition and seasonal dynamics of the meroplankton of the coastal zone of the northeastern Black Sea
    Zh. P. Selifonova
    Russian Journal of Marine Biology, 2012, 38 : 1 - 9
  • [5] Taxonomic composition and seasonal dynamics of the meroplankton of the coastal zone of the northeastern Black Sea
    Selifonova, Zh. P.
    RUSSIAN JOURNAL OF MARINE BIOLOGY, 2012, 38 (01) : 1 - 9
  • [6] The subway microbiome: seasonal dynamics and direct comparison of air and surface bacterial communities
    Gohli, Jostein
    Boifot, Kari Oline
    Moen, Line Victoria
    Pastuszek, Paulina
    Skogan, Gunnar
    Udekwu, Klas, I
    Dybwad, Marius
    MICROBIOME, 2019, 7 (01)
  • [7] The subway microbiome: seasonal dynamics and direct comparison of air and surface bacterial communities
    Jostein Gohli
    Kari Oline Bøifot
    Line Victoria Moen
    Paulina Pastuszek
    Gunnar Skogan
    Klas I. Udekwu
    Marius Dybwad
    Microbiome, 7
  • [8] Taxonomic composition of phytoplankton in the Vakh River (Western Siberia)
    Skorobogatova, O. N.
    5TH INTERNATIONAL FIELD SYMPOSIUM WEST SIBERIAN PEATLANDS AND CARBON CYCLE: PAST AND PRESENT AND THE INTERNATIONAL CONFERENCE CARBON BALANCE OF WESTERN SIBERIAN MIRES IN THE CONTEXT OF CLIMATE CHANGE, 2018, 138
  • [9] Seasonal dynamics of phytoplankton in two warm temperate reservoirs: association of taxonomic composition with temperature
    Grover, JP
    Chrzanowski, TH
    JOURNAL OF PLANKTON RESEARCH, 2006, 28 (01) : 1 - 17
  • [10] Taxonomic composition and seasonal dynamics of meroplankton in coastal waters of the northeastern Black Sea shelf
    Selifonova, Zh P.
    BIOLOGIYA MORYA-MARINE BIOLOGY, 2012, 38 (01): : 3 - 10