Thaumatin-Like Protein (TLP) Gene Family in Barley: Genome-Wide Exploration and Expression Analysis during Germination

被引:25
|
作者
Iqbal, Irfan [1 ]
Tripathi, Rajiv Kumar [1 ,2 ]
Wilkins, Olivia [1 ,2 ]
Singh, Jaswinder [1 ]
机构
[1] McGill Univ, Plant Sci Dept, 21111 Lakeshore Rd, Quebec City, PQ H9X 3V9, Canada
[2] Univ Manitoba, Dept Biol Sci, Winnipeg, MB R3T 2N2, Canada
基金
加拿大自然科学与工程研究理事会;
关键词
barley; cereals; thaumatin like-proteins; phylogenetics; expression analysis; OVEREXPRESSION; RESISTANCE; STRESS; FRUIT;
D O I
10.3390/genes11091080
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Thaumatin-like Proteins (TLPs) are known to play a vital role in plant defense, developmental processes and seed germination. We identified 19 TLP genes from the reference genome of barley and 37, 28 and 35 TLP genes from rice, Brachypodium and sorghum genomes, respectively. Comparative phylogenetic analysis classified the TLP family into nine groups. Localized gene duplications with diverse exon/intron structures contributed to the expansion of the TLP gene family in cereals. Most of the barley TLPs were localized on chromosome 5H. The spatiotemporal expression pattern of HvTLP genes indicated their predominant expression in the embryo, developing grains, root and shoot tissues. Differential expression of HvTLP14, HvTLP17 and HvTLP18 in the malting variety (Morex) over 16-96 h of grain germination revealed their possible role in malting. This study provides a description of the TLP gene family in barley and their possible involvement in seed germination and the malting process.
引用
收藏
页码:1 / 14
页数:14
相关论文
共 50 条
  • [1] Expansion and evolution of thaumatin-like protein (TLP) gene family in six plants
    Cao, Jun
    Lv, Yueqing
    Hou, Zuoran
    Li, Xiang
    Ding, Lina
    PLANT GROWTH REGULATION, 2016, 79 (03) : 299 - 307
  • [2] Expansion and evolution of thaumatin-like protein (TLP) gene family in six plants
    Jun Cao
    Yueqing Lv
    Zuoran Hou
    Xiang Li
    Lina Ding
    Plant Growth Regulation, 2016, 79 : 299 - 307
  • [3] Genome-wide identification of thaumatin-like protein family in pear and functional analysis their roles in pollen growth
    Zhang, Hao
    Liu, Xueying
    Tang, Chao
    Qian, Ming
    Zhang, Mingliang
    Xie, Zhu
    Wu, Mayan
    Khan, Waqar
    Zhang, Shaoling
    Wu, Juyou
    Wang, Peng
    PLANT GROWTH REGULATION, 2024, 104 (01) : 267 - 282
  • [4] Genome-wide identification of thaumatin-like protein family genes in Panax notoginseng and analysis of their responses to Fusarium solani infection
    Yang, Yun
    Guan, Huilin
    Wei, Fugang
    Li, Zecheng
    Yang, Shaozhou
    Huang, Jingxin
    GENETIC RESOURCES AND CROP EVOLUTION, 2024, 71 (05) : 2267 - 2279
  • [5] Genome-wide identification of thaumatin-like protein family genes in Panax notoginseng and analysis of their responses to Fusarium solani infection
    Yun Yang
    Huilin Guan
    Fugang Wei
    Zecheng Li
    Shaozhou Yang
    Jingxin Huang
    Genetic Resources and Crop Evolution, 2024, 71 : 2267 - 2279
  • [6] Genome-Wide Identification of the Thaumatin-like Protein Family Genes in Gossypium barbadense and Analysis of Their Responses to Verticillium dahliae Infection
    Zhang, Yilin
    Chen, Wei
    Sang, Xiaohui
    Wang, Ting
    Gong, Haiyan
    Zhao, Yunlei
    Zhao, Pei
    Wang, Hongmei
    PLANTS-BASEL, 2021, 10 (12):
  • [7] Genome-wide analysis of eukaryote thaumatin-like proteins (TLPs) with an emphasis on poplar
    Benjamin Petre
    Ian Major
    Nicolas Rouhier
    Sébastien Duplessis
    BMC Plant Biology, 11
  • [8] Genome-wide analysis of eukaryote thaumatin-like proteins (TLPs) with an emphasis on poplar
    Petre, Benjamin
    Major, Ian
    Rouhier, Nicolas
    Duplessis, Sebastien
    BMC PLANT BIOLOGY, 2011, 11
  • [9] Thaumatin-like Protein (TLP) Genes in Garlic (Allium sativum L.): Genome-Wide Identification, Characterization, and Expression in Response to Fusarium proliferatum Infection
    Anisimova, Olga K.
    Kochieva, Elena Z.
    Shchennikova, Anna, V
    Filyushin, Mikhail A.
    PLANTS-BASEL, 2022, 11 (06):
  • [10] Genome-wide identification and characterization of thaumatin-like protein family genes in wheat and analysis of their responses to Fusarium head blight infection
    Ren, Runsheng
    Zhou, Xinli
    Zhang, Xu
    Li, Xin
    Zhang, Pingping
    He, Yi
    FOOD PRODUCTION PROCESSING AND NUTRITION, 2022, 4 (01)