Increased hydrophobic surface exposure in the cataract-related G18V variant of human γS-crystallin

被引:18
|
作者
Khago, Domarin [1 ]
Wong, Eric K. [1 ]
Kingsley, Carolyn N. [1 ]
Freites, J. Alfredo [1 ]
Tobias, Douglas J. [1 ]
Martin, Rachel W. [1 ,2 ]
机构
[1] Univ Calif Irvine, Dept Chem, Irvine, CA 92697 USA
[2] Univ Calif Irvine, Dept Mol Biol & Biochem, Irvine, CA 92697 USA
来源
基金
美国国家科学基金会; 美国国家卫生研究院;
关键词
Structural crystallin; Cataract; Protein aggregation; Chemical shift perturbation; ANS binding assay; Docking; CHEMICAL-SHIFT PERTURBATION; ALPHA-B-CRYSTALLIN; BINDING; DOCKING; MUTANT; AGGREGATION; PROTEINS; EXPRESSION; SYSTEM;
D O I
10.1016/j.bbagen.2015.09.022
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Background: The objective of this study was to determine whether the cataract-related G18V variant of human gamma S-crystallin has increased exposure of hydrophobic residues that could explain its aggregation propensity and/or recognition by alpha B-crystallin. Methods: We used an ANS fluorescence assay and NMR chemical shift perturbation to experimentally probe exposed hydrophobic surfaces. These results were compared to flexible docking simulations of ANS molecules to the proteins, starting with the solution-state NMR structures of gamma S-WT and gamma S-G18V. Results: gamma S-G18V exhibits increased ANS fluorescence, suggesting increased exposed hydrophobic surface area. The specific residues involved in ANS binding were mapped by NMR chemical shift perturbation assays, revealing ANS binding sites in gamma S-G18V that are not present in gamma S-WT. Molecular docking predicts three binding sites that are specific to gamma S-G18V corresponding to the exposure of a hydrophobic cavity located at the interdomain interface, as well as two hydrophobic patches near a disordered loop containing solvent-exposed cysteines, all but one of which is buried in gamma S-WT. Conclusions: Although both proteins display non-specific binding, more residues are involved in ANS binding to gamma S-G18V, and the affected residues are localized in the N-terminal domain and the nearby interdomain interface, proximal to the mutation site. General significance: Characterization of changes in exposed hydrophobic surface area between wild-type and variant proteins can help elucidate the mechanisms of aggregation propensity and chaperone recognition, presented here in the context of cataract formation. Experimental data and simulations provide complementary views of the interactions between proteins and the small molecule probes commonly used to study aggregation. This article is part of a Special Issue entitled Crystallin Biochemistry in Health and Disease. (C) 2015 Elsevier B.V. All rights reserved.
引用
收藏
页码:325 / 332
页数:8
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