A novel cluster of mariner-like elements belonging to mellifera subfamily from spiders and insects: implications of recent horizontal transfer on the South-West Islands of Japan

被引:1
|
作者
Yamada, Kaori [1 ]
Kawanishi, Yuichi [2 ]
Yamada, Akinori [2 ,3 ]
Tokuda, Gaku [1 ,2 ]
Gurung, Raj Deep [1 ]
Sasaki, Takeshi [4 ]
Nakajima, Yumiko [1 ,2 ]
Maekawa, Hideaki [2 ]
机构
[1] Univ Ryukyus, Grad Sch Sci & Engn, Nishihara, Okinawa 9030213, Japan
[2] Univ Ryukyus, Ctr Mol Biosci, Trop Biosphere Res Ctr, Nishihara, Okinawa 9030213, Japan
[3] Nagasaki Univ, Fac Fisheries, Nagasaki 8528521, Japan
[4] Univ Ryukyus, Univ Museum, Nishihara, Okinawa 9030213, Japan
关键词
Mariner-like elements; Mellifera subfamily; Transposable elements; Horizontal transfer; BOMBUS-TERRESTRIS HYMENOPTERA; MEDITERRANEAN FRUIT-FLY; TRANSPOSABLE ELEMENT; FLIES DIPTERA; FULL-LENGTH; BUMBLE BEE; SUPERFAMILY; EVOLUTION; CLONING; WIDESPREAD;
D O I
10.1007/s10709-014-9762-9
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Mariner-like elements (MLEs) have been isolated from various eukaryotic genomes and they are divided into 15 subfamilies, including main five subfamilies: mauritiana, cecropia, mellifera/capitata, irritans, and elegans/briggsae. In the present study, MLEs belonging to mellifera subfamily were isolated from various spiders and insects (Hymenoptera and Lepidoptera) inhabiting the South-West Islands of Japan and neighboring regions. MLEs isolated from 15 different species formed a distinct novel cluster in mellifera subfamily. MLEs obtained from three different species [i.e., the bee Amegilla senahai subflavescens (Amsmar1), the wasp Campsomeris sp. (Casmar1), and the swallowtail butterfly Pachliopta aristolochiae (Paamar1)] contained an intact open reading frame that encoded a putative transposase. These transposases exhibited high similarity of 97.9 % among themselves. In case of Casmar1, the presence of an intact ORF was found in high frequencies (i.e., 11 out of 12 clones). In addition, these transposases also showed the presence of a terminal inverted repeat-binding motif, DD(34)D and two highly conserved amino acid motifs, (W/L)(I/L)PHQL and YSP(D/N)L(A/S)P. These two motifs differed from previously known motifs, WVPHEL and YSPDLAP. MLEs isolated from these three different species may have been inserted into their genomes by horizontal transfer. Furthermore, the presence of an intact ORF suggests that they are still active in habitats along these isolated islands.
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页码:149 / 160
页数:12
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  • [1] A novel cluster of mariner-like elements belonging to mellifera subfamily from spiders and insects: implications of recent horizontal transfer on the South-West Islands of Japan
    Kaori Yamada
    Yuichi Kawanishi
    Akinori Yamada
    Gaku Tokuda
    Raj Deep Gurung
    Takeshi Sasaki
    Yumiko Nakajima
    Hideaki Maekawa
    Genetica, 2014, 142 : 149 - 160