RNA-Seq Analysis Reveals a Positive Role of HTR2A in Adipogenesis in Yan Yellow Cattle

被引:30
|
作者
Yun, Jinyan [1 ,2 ]
Jin, Haiguo [1 ]
Cao, Yang [1 ]
Zhang, Lichun [1 ]
Zhao, Yumin [1 ]
Jin, Xin [2 ]
Yu, Yongsheng [1 ]
机构
[1] Jilin Acad Agr Sci, Branch Anim Husb, 186 Dongxinghua Rd, Gongzhuling 136100, Peoples R China
[2] Yanbian Univ, Agr Coll, 977 Gongyuan Rd, Yanji 133002, Peoples R China
来源
关键词
adipogenesis; RNA-Seq; DEGs; HTR2A; PI3K; Akt signaling pathway; PROTEIN-KINASE-B; 5-HT2A RECEPTOR-BINDING; 3T3-L1; ADIPOCYTES; ABDOMINAL OBESITY; CLONAL EXPANSION; SKELETAL-MUSCLE; ADIPOSE-TISSUES; GENE PROMOTER; VISCERAL FAT; EXPRESSION;
D O I
10.3390/ijms19061760
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
In this study, we performed high throughput RNA sequencing at the primary bovine preadipocyte (Day-0), mid-differentiation (Day-4), and differentiated adipocyte (Day-9) stages in order to characterize the transcriptional events regulating differentiation and function. The preadipocytes were isolated from subcutaneous fetal bovine adipose tissues and were differentiated into mature adipocytes. The adipogenic characteristics of the adipocytes were detected during various stages of adipogenesis (Day-0, Day-4, and Day-9). We used RNA sequencing (RNA-seq) to investigate a comprehensive transcriptome information of adipocytic differentiation. Compared to the pre-differentiation stage (Day-0), 2510 genes were identified as differentially expressed genes (DEGs) at the mid-differentiation stage (Day-4). We found 2446 DEGs in the mature adipocytic stage relative to the mid-differentiation stage. Some adipogenesis-related transcription factors, CCAAT-enhancer-binding protein (C/EBP) and peroxisome proliferator-activated receptor (PPAR) were differentially expressed at Day-0, Day-4, and Day-9. We further investigated the adipogenic function of 5-hydroxytryptamine receptor 2A (HTR2A) in adipogenesis. Overexpression of HTR2A stimulated the differentiation of preadipocytes, and knockdown of HTR2A had opposite effects. Furthermore, functional enrichment analysis of DEGs revealed that the PI3K-Akt signaling pathway was the significantly enriched pathway, and HTR2A regulated adipogenesis by activating or inhibiting phosphorylation of phospho-AKT (Ser473). In summary, the present study provides the first comparative transcription of various periods of adipocytes in cattle, which presents a solid foundation for further study into the molecular mechanism of fat deposition and the improvement of beef quality in cattle.
引用
收藏
页数:17
相关论文
共 50 条
  • [1] RNA-Seq Analysis Reveals a Negative Role of KLF16 in Adipogenesis
    Jang, Min-Kyung
    Lee, Sunwoo
    Jung, Myeong Ho
    PLOS ONE, 2016, 11 (09):
  • [2] RNA-Seq analysis reveals the potential molecular mechanisms of daidzein on adipogenesis in subcutaneous adipose tissue of finishing Xianan beef cattle
    Liang, Huan
    Xu, Lanjiao
    Zhao, Xianghui
    Pan, Ke
    Yi, Zhonghua
    Bai, Jun
    Qi, Xinglei
    Xin, Junping
    Li, Meifa
    Ouyang, Kehui
    Song, Xiaozhen
    Liu, Chanjuan
    Qu, Mingren
    JOURNAL OF ANIMAL PHYSIOLOGY AND ANIMAL NUTRITION, 2020, 104 (01) : 1 - 11
  • [3] RNA-seq reveal role of bovine TORC2 in the regulation of adipogenesis
    Khan, Rajwali
    Raza, Sayed Haidar Abbas
    Junjvlieke, Zainaguli
    Wang, Hongbao
    Cheng, Gong
    Smith, Stephen B.
    Jiang, Zhongliang
    Li, Anning
    Zan, Linsen
    ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS, 2020, 680
  • [4] RNA-seq analysis reveals the critical role of the novel lnc RNA BIANCR in intramuscular adipogenesis through the ERK1/2 signaling pathway
    Xinhao Ma
    Xinran Yang
    Dianqi Zhang
    Wenzhen Zhang
    Xiaoyu Wang
    Kuncheng Xie
    Jie He
    Chugang Mei
    Linsen Zan
    Journal of Animal Science and Biotechnology, 2023, 14 (03) : 917 - 935
  • [5] RNA-seq analysis reveals the positive role of KLF5 in the differentiation of subcutaneous adipocyte in goats
    Li, Xin
    Zhang, Hao
    Wang, Yong
    Li, Yanyan
    He, Changsheng
    Zhu, Jiangjiang
    Xiong, Yan
    Lin, Yaqiu
    GENE, 2022, 808
  • [6] RNA-seq analysis reveals the critical role of the novel lncRNA BIANCR in intramuscular adipogenesis through the ERK1/2 signaling pathway
    Ma, Xinhao
    Yang, Xinran
    Zhang, Dianqi
    Zhang, Wenzhen
    Wang, Xiaoyu
    Xie, Kuncheng
    He, Jie
    Mei, Chugang
    Zan, Linsen
    JOURNAL OF ANIMAL SCIENCE AND BIOTECHNOLOGY, 2023, 14 (01)
  • [7] RNA-seq analysis reveals the critical role of the novel lncRNA BIANCR in intramuscular adipogenesis through the ERK1/2 signaling pathway
    Xinhao Ma
    Xinran Yang
    Dianqi Zhang
    Wenzhen Zhang
    Xiaoyu Wang
    Kuncheng Xie
    Jie He
    Chugang Mei
    Linsen Zan
    Journal of Animal Science and Biotechnology, 14
  • [8] RNA-seq Based Transcriptome Analysis Reveals Role of Myoglobin in Rheumatoid Arthritis
    Wang, Haibin
    Tian, Xin
    Ji, Le
    Shi, Liang
    Wang, Ying
    INFLAMMATION, 2024,
  • [9] RNA-Seq reveals the potential molecular mechanisms of bovine KLF6 gene in the regulation of adipogenesis
    Raza, Sayed Haidar Abbas
    Khan, Rajwali
    Cheng, Gong
    Long, Feng
    Bing, Sun
    Easa, Ahmed A.
    Schreurs, Nicola M.
    Pant, Sameer D.
    Zhang, Wenzhen
    Li, Anning
    Zan, Linsen
    INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES, 2022, 195 : 198 - 206
  • [10] Small RNA-Seq Analysis Reveals miRNA Expression of Short Distance Transportation Stress in Beef Cattle Blood
    Wu, Mingli
    Tang, Xiaoqin
    Raza, Sayed Haidar Abbas
    Zhao, Haidong
    Li, Qi
    Yi, Xiaohua
    Althobaiti, Fayez
    Shukry, Mustafa
    Sun, Xiuzhu
    ANIMALS, 2021, 11 (10):