Toward an integrated software platform for systems pharmacology

被引:10
|
作者
Ghosh, Samik [1 ,2 ]
Matsuoka, Yukiko [1 ,3 ]
Asai, Yoshiyuki [4 ]
Hsin, Kun-Yi [4 ]
Kitano, Hiroaki [1 ,2 ,4 ]
机构
[1] Syst Biol Inst, Minato Ku, Tokyo 1080071, Japan
[2] RIKEN Ctr Integrat Med Sci, Dis Syst Modeling Lab, Yokohama, Kanagawa 2300045, Japan
[3] JST ERATO Kawaoka Infect Induced Host Response Pr, Minato Ku, Tokyo 1088639, Japan
[4] Okinawa Inst Sci & Technol, Kunigami, Okinawa 9040412, Japan
关键词
systems pharmacology; systems biology; integrated software platform; ESCHERICHIA-COLI; GENE-EXPRESSION; SEGREGATING POPULATIONS; MACULAR DEGENERATION; BIOLOGICAL NETWORKS; REGULATORY NETWORKS; MINIMUM INFORMATION; NUMERICAL-ANALYSIS; PATHWAY; SBML;
D O I
10.1002/bdd.1875
中图分类号
R9 [药学];
学科分类号
1007 ;
摘要
Understanding complex biological systems requires the extensive support of computational tools. This is particularly true for systems pharmacology, which aims to understand the action of drugs and their interactions in a systems context. Computational models play an important role as they can be viewed as an explicit representation of biological hypotheses to be tested. A series of software and data resources are used for model development, verification and exploration of the possible behaviors of biological systems using the model that may not be possible or not cost effective by experiments. Software platforms play a dominant role in creativity and productivity support and have transformed many industries, techniques that can be applied to biology as well. Establishing an integrated software platform will be the next important step in the field. (c) 2013 The Authors. Biopharmaceutics & Drug Disposition published by John Wiley & Sons, Ltd.
引用
收藏
页码:508 / 526
页数:19
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