A tendril perversion in a helical oligomer: trapping and characterizing a mobile screw-sense reversal

被引:36
|
作者
Tomsett, Michael [1 ]
Maffucci, Irene [2 ]
Le Bailly, Bryden A. F. [1 ]
Byrne, Liam [3 ]
Bijvoets, Stefan M. [3 ]
Lizio, M. Giovanna [3 ,4 ]
Raftery, James [3 ]
Butts, Craig P. [1 ]
Webb, Simon J. [3 ,4 ]
Contini, Alessandro [2 ]
Clayden, Jonathan [1 ]
机构
[1] Univ Bristol, Sch Chem, Cantocks Close, Bristol BS8 1TS, Avon, England
[2] Univ Milan, Dipartimento Sci Farmaceut, Sez Chim Gen & Organ Alessandro Marchesini, Via Venezian 21, I-20133 Milan, Italy
[3] Univ Manchester, Sch Chem, Oxford Rd, Manchester M13 9PL, Lancs, England
[4] Univ Manchester, Manchester Inst Biotechnol, 131 Princess St, Manchester M1 7DN, Lancs, England
基金
英国工程与自然科学研究理事会; 英国生物技术与生命科学研究理事会;
关键词
L-AMINO-ACID; END CONFORMATIONAL COMMUNICATION; ALPHA-AMINOISOBUTYRIC-ACID; ACHIRAL PEPTIDE-CHAIN; AMBER FORCE-FIELDS; MOLECULAR-DYNAMICS; LINEAR OLIGOPEPTIDES; SECONDARY STRUCTURE; CIRCULAR-DICHROISM; EXPLICIT SOLVENT;
D O I
10.1039/c6sc05474a
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Helical oligomers of achiral monomers adopt domains of uniform screw sense, which are occasionally interrupted by screw-sense reversals. These rare, elusive, and fast-moving features have eluded detailed characterization. We now describe the structure and habits of a screw-sense reversal trapped within a fragment of a helical oligoamide foldamer of the achiral quaternary amino acid 2-aminoisobutyric acid (Aib). The reversal was enforced by compelling the amide oligomer to adopt a right-handed screw sense at one end and a left-handed screw sense at the other. The trapped reversal was characterized by X-ray crystallography, and its dynamic properties were monitored by NMR and circular dichroism, and modelled computationally. Raman spectroscopy indicated that a predominantly helical architecture was maintained despite the reversal. NMR and computational results indicated a stepwise shift from one screw sense to another on moving along the helical chain, indicating that in solution the reversal is not localised at a specific location, but is free to migrate across a number of residues. Analogous unconstrained screw-sense reversals that are free to move within a helical structure are likely to provide the mechanism by which comparable helical polymers and foldamers undergo screw-sense inversion.
引用
收藏
页码:3007 / 3018
页数:12
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