Fenoterol and dobutamine as SARS-CoV-2 main protease inhibitors: A virtual screening study

被引:6
|
作者
Bolelli, Kayhan [1 ,2 ,3 ]
Ertan-Bolelli, Tugba [1 ,2 ]
Unsalan, Ozan [4 ]
Altunayar-Unsalan, Cisem [5 ]
机构
[1] Ankara Univ, Fac Pharm, Dept Pharmaceut Chem, TR-06560 Ankara, Turkey
[2] Bolelli Lab LLC, Stone Mt, GA 30083 USA
[3] LumiLabs, TR-06610 Ankara, Turkey
[4] Ege Univ, Fac Sci, Dept Phys, TR-35100 Izmir, Turkey
[5] Ege Univ, Cent Res Testing & Anal Lab Res & Applicat Ctr, TR-35100 Izmir, Turkey
关键词
COVID-19; Dobutamine; Drug discovery; Fenoterol; Molecular docking; Virtual screening; DRUG; DISCOVERY; DOCKING; GLIDE; ZINC;
D O I
10.1016/j.molstruc.2020.129449
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Global health is under heavy threat by a worldwide pandemic caused by a new type of coronavirus (COVID-19) since its rapid spread in China in 2019 [1]. Currently, there are no approved specific drugs and effective treatment for COVID-19 infection, but several available drugs are known to facilitate tentative treatment. Since drug design, development and testing procedures are time-consuming , virtual screening studies with the aid of available drug databases take the initiative at this point and save the time. Besides, drug repurposing strategies promises to identify new agents for the novel diseases in a time-critical fashion. In this study, we used structure based virtual screening method on FDA approved drugs and compounds in clinical trials. As a result of this study we choose three most prominent compounds for further studies. Here we show that these three compounds (dobutamine and its two derivatives) can be considered as promising inhibitors for SARS-CoV-2 main protease and results also demonstrate the possible interactions of dobutamine and its derivatives with SARS-CoV-2 main protease (6W63) [6]. Our efforts in this work directly address current urgency of a new drug discovery against COVID-19. (C) 2020 Elsevier B.V. All rights reserved.
引用
收藏
页数:6
相关论文
共 50 条
  • [1] Virtual screening of approved drugs as potential SARS-CoV-2 main protease inhibitors
    Jimenez-Alberto, Alicia
    Maria Ribas-Aparicio, Rosa
    Aparicio-Ozores, Gerardo
    Castelan-Vega, Juan A.
    [J]. COMPUTATIONAL BIOLOGY AND CHEMISTRY, 2020, 88
  • [2] Ensemble docking based virtual screening of SARS-CoV-2 main protease inhibitors
    Fomina, Anastasia D.
    Uvarova, Victoria I.
    Kozlovskaya, Liubov I.
    Palyulin, Vladimir A.
    Osolodkin, Dmitry I.
    Ishmukhametov, Aydar A.
    [J]. MOLECULAR INFORMATICS, 2024, 43 (08)
  • [3] Biochemical screening for SARS-CoV-2 main protease inhibitors
    Coelho, Camila
    Gallo, Gloria
    Campos, Claudia B.
    Hardy, Leon
    Wurtele, Martin
    [J]. PLOS ONE, 2020, 15 (10):
  • [4] Noncovalent SARS-COV-2 main protease inhibitors: A virtual screening and molecular dynamic simulation study
    Yan, Aoxiang
    Li, Wei
    Zhao, Xu
    Cao, Ruiyuan
    Li, Hua
    Chen, Lixia
    Li, Xingzhou
    [J]. RESULTS IN CHEMISTRY, 2024, 7
  • [5] High Throughput Virtual Screening to Discover Inhibitors of the Main Protease of the Coronavirus SARS-CoV-2
    Olubiyi, Olujide O.
    Olagunju, Maryam
    Keutmann, Monika
    Loschwitz, Jennifer
    Strodel, Birgit
    [J]. MOLECULES, 2020, 25 (14):
  • [6] Artificial intelligence based virtual screening study for competitive and allosteric inhibitors of the SARS-CoV-2 main protease
    Charles, Ssemuyiga
    Edgar, Mulumba Pius
    Mahapatra, Rajani Kanta
    [J]. JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS, 2023, 41 (24): : 15286 - 15304
  • [7] Virtual Screening of Artemisia annua Phytochemicals as Potential Inhibitors of SARS-CoV-2 Main Protease Enzyme
    Miandad, Khalid
    Ullah, Asad
    Bashir, Kashif
    Khan, Saifullah
    Abideen, Syed Ainul
    Shaker, Bilal
    Alharbi, Metab
    Alshammari, Abdulrahman
    Ali, Mahwish
    Haleem, Abdul
    Ahmad, Sajjad
    [J]. MOLECULES, 2022, 27 (22):
  • [8] Virtual screening of peptides with high affinity for SARS-CoV-2 main protease
    Porto, William Farias
    [J]. COMPUTERS IN BIOLOGY AND MEDICINE, 2021, 133
  • [9] Virtual screening for functional foods against the main protease of SARS-CoV-2
    Wang, Jiao
    Zhang, Xiaoli
    Omarini, Alejandra B.
    Li, Binglin
    [J]. JOURNAL OF FOOD BIOCHEMISTRY, 2020, 44 (11)
  • [10] Identification of highly effective inhibitors against SARS-CoV-2 main protease: From virtual screening to in vitro study
    Wang, Hu
    Wen, Jun
    Yang, Yang
    Liu, Hailin
    Wang, Song
    Ding, Xiaoli
    Zhou, Chunqiao
    Zhang, Xuelin
    [J]. FRONTIERS IN PHARMACOLOGY, 2022, 13