High-resolution HLA allele and haplotype frequencies of the Saudi Arabian population based on 45,457 individuals and corresponding stem cell donor matching probabilities

被引:9
|
作者
Alfraih, Feras [1 ]
Alawwami, Moheeb [1 ]
Aljurf, Mahmoud [1 ]
Alhumaidan, Hind [1 ]
Alsaedi, Hawazen [1 ]
El Fakih, Riad [1 ]
Alotaibi, Bander [1 ]
Rasheed, Walid [1 ]
Bernas, Stefanie N. [2 ]
Massalski, Carolin [3 ]
Heidl, Annett [3 ]
Sauter, Jurgen [2 ]
Lange, Vinzenz [3 ]
Schmidt, Alexander H. [2 ,3 ]
机构
[1] King Faisal Specialist Hosp & Res Ctr, Riyadh, Saudi Arabia
[2] DKMS, Tubingen, Germany
[3] DKMS Life Sci Lab, Dresden, Germany
关键词
HLA; Haplotype frequency; Allele frequency; Matching probability; Donor registry; Saudi Arabia;
D O I
10.1016/j.humimm.2020.12.006
中图分类号
R392 [医学免疫学]; Q939.91 [免疫学];
学科分类号
100102 ;
摘要
We estimated HLA allele and haplotype frequencies of the Saudi Arabian population from a sample of 45,457 registered stem cell donors. The most frequent HLA alleles were A*02:01g (18.5%), C*06:02g (16.1%), B*51:01g (14.1%), DRB1*07:01g (16.2%), DQB1*02:01g (30.5%), and DPB1*04:01g (33.6%). The most frequent 5-locus haplotypes were A*02:05g similar to C*06:02g similar to B*50:01g similar to DRB1*07:01g similar to DQB1*02:01g (1.73%), A*02:01g similar to C*06:02g similar to B*50:01g similar to DRB1*07:01g similar to DQB1*02:01g (1.66%), and A*26:01g similar to C*07:02g ,B*08:01g similar to DRB1*03:01g similar to DQB1*02:01g (1.38%). Furthermore, we used the calculated haplotype frequencies to estimate stem cell donor matching probabilities for Saudi Arabian donor and patient populations under various matching requirements. These results are relevant for strategic donor registry planning in the Kingdom of Saudi Arabia. (c) 2020 The Author(s). Published by Elsevier Inc. on behalf of American Society for Histocompatibility and Immunogenetics. This is an open access article under the CC BY-NC-ND license (http://creativecommons. org/licenses/by-nc-nd/4.0/).
引用
收藏
页码:97 / 102
页数:6
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