Vibrio Trends in the Ecology of the Venice Lagoon

被引:18
|
作者
Rahman, Mohammad Shamsur [1 ,4 ]
Martino, Maria Elena [1 ]
Cardazzo, Barbara [1 ]
Facco, Pierantonio [2 ]
Bordin, Paola [3 ]
Mioni, Renzo [3 ]
Novelli, Enrico [1 ]
Fasolato, Luca [1 ]
机构
[1] Univ Padua, Dept Comparat Biomed & Food Sci, Legnaro, Italy
[2] Univ Padua, Dept Ind Engn, Comp Aided Proc Engn Lab, Padua, Italy
[3] Ist Zooprofilatt Sperimentale Venezie, Lab Batteriol Alimenti, Legnaro, Italy
[4] Univ Dhaka, Dept Fisheries, Dhaka 1000, Bangladesh
关键词
MULTILOCUS SEQUENCE-ANALYSIS; MULTIPLEX PCR ASSAY; BIOCHEMICAL-IDENTIFICATION; PARAHAEMOLYTICUS STRAINS; ONLINE TOOL; DIVERSITY; HARVEYI; MISIDENTIFICATION; SEASONALITY; CHOLERAE;
D O I
10.1128/AEM.04133-13
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Vibrio is a very diverse genus that is responsible for different human and animal diseases. The accurate identification of Vibrio at the species level is important to assess the risks related to public health and diseases caused by aquatic organisms. The ecology of Vibrio spp., together with their genetic background, represents an important key for species discrimination and evolution. Thus, analyses of population structure and ecology association are necessary for reliable characterization of bacteria and to investigate whether bacterial species are going through adaptation processes. In this study, a population of Vibrionaceae was isolated from shellfish of the Venice lagoon and analyzed in depth to study its structure and distribution in the environment. A multilocus sequence analysis (MLSA) was developed on the basis of four housekeeping genes. Both molecular and biochemical approaches were used for species characterization, and the results were compared to assess the consistency of the two methods. In addition, strain ecology and the association between genetic information and environment were investigated through statistical models. The phylogenetic and population analyses achieved good species clustering, while biochemical identification was demonstrated to be imprecise. In addition, this study provided a fine-scale overview of the distribution of Vibrio spp. in the Venice lagoon, and the results highlighted a preferential association of the species toward specific ecological variables. These findings support the use of MLSA for taxonomic studies and demonstrate the need to consider environmental information to obtain broader and more accurate bacterial characterization.
引用
收藏
页码:2372 / 2380
页数:9
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