Quantitative analyses of the plant cytoskeleton reveal underlying organizational principles

被引:12
|
作者
Breuer, David [1 ]
Ivakov, Alexander [1 ]
Sampathkumar, Arun [2 ]
Hollandt, Florian [1 ]
Persson, Staffan [1 ,3 ]
Nikoloski, Zoran [1 ]
机构
[1] Max Planck Inst Mol Plant Physiol, D-14476 Potsdam, Germany
[2] Univ Cambridge, Sainsbury Lab, Cambridge CB2 1LR, England
[3] Univ Melbourne, Sch Bot, ARC Ctr Excellence Plant Cell Walls, Parkville, Vic 3010, Australia
关键词
cytoskeletal networks; cytoskeletal transport; plant cell walls; complex networks; organizational principles; MICROTUBULE DYNAMICS; ACTIN CYTOSKELETON; CELLULOSE SYNTHASE; CORTICAL MICROTUBULES; PLASMA-MEMBRANE; GENERAL-MODEL; LIVE-CELL; GROWTH; NETWORKS; TRAFFICKING;
D O I
10.1098/rsif.2014.0362
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The actin and microtubule (MT) cytoskeletons are vital structures for cell growth and development across all species. While individual molecular mechanisms underpinning actin and MT dynamics have been intensively studied, principles that govern the cytoskeleton organization remain largely unexplored. Here, we captured biologically relevant characteristics of the plant cytoskeleton through a network-driven imaging-based approach allowing us to quantitatively assess dynamic features of the cytoskeleton. By introducing suitable null models, we demonstrate that the plant cytoskeletal networks exhibit properties required for efficient transport, namely, short average path lengths and high robustness. We further show that these advantageous features are maintained during temporal cytoskeletal rearrangements. Interestingly, man-made transportation networks exhibit similar properties, suggesting general laws of network organization supporting diverse transport processes. The proposed network-driven analysis can be readily used to identify organizational principles of cytoskeletons in other organisms.
引用
收藏
页数:10
相关论文
共 50 条
  • [1] Mechanistic principles underlying regulation of the actin cytoskeleton by phosphoinositides
    Senju, Yosuke
    Kalimeri, Maria
    Koskela, Essi V.
    Somerharju, Pentti
    Zhao, Hongxia
    Vattulainen, Ilpo
    Lappalainen, Pekka
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2017, 114 (43) : E8977 - E8986
  • [3] Mechanistic principles underlying regulation of the actin cytoskeleton by phosphoinositides.
    Senju, Y.
    Kalimeri, M.
    Koskela, E.
    Somerharju, P.
    Zhao, H.
    Vattulainen, I.
    Lappalainen, P.
    MOLECULAR BIOLOGY OF THE CELL, 2017, 28
  • [4] Mechanistic principles underlying regulation of the actin cytoskeleton by phosphoinositides.
    Senju, Y.
    Kalimeri, M.
    Koskela, E.
    Somerharju, P.
    Zhao, H.
    Vattulainen, I.
    Lappalainen, P.
    MOLECULAR BIOLOGY OF THE CELL, 2017, 28
  • [5] Comparative Transcriptome Analyses Reveal the Mechanisms Underlying Waterlogging Tolerance in Barley
    Zhu, Juan
    Yin, Haoxin
    Cao, Cong
    Sun, Chengqun
    Zhang, Mengna
    Hong, Yi
    Zhang, Yuhang
    Lv, Chao
    Guo, Baojian
    Wang, Feifei
    Xu, Rugen
    PLANTS-BASEL, 2025, 14 (01):
  • [6] Genomic and Phenotypic Analyses Reveal Mechanisms Underlying Homing Ability in Pigeon
    Shao, Yong
    Tian, Hang-Yu
    Zhang, Jing-Jing
    Kharrati-Koopaee, Hamed
    Guo, Xing
    Zhuang, Xiao-Lin
    Li, Ming-Li
    Nanaie, Hojat Asadollahpour
    Tafti, Elahe Dehghani
    Shojaei, Bahador
    Namavar, Mohammad Reza
    Sotoudeh, Narges
    Ayoola, Adeola Oluwakemi
    Li, Jia-Li
    Liang, Bin
    Esmailizadeh, Ali
    Wang, Shu
    Wu, Dong-Dong
    MOLECULAR BIOLOGY AND EVOLUTION, 2020, 37 (01) : 134 - 148
  • [7] ORGANIZATIONAL PRINCIPLES UNDERLYING ACTIVE IDENTIFICATION OF PATIENTS WITH MALIGNANT-TUMORS
    SERGEEV, SI
    SOVETSKAYA MEDITSINA, 1976, (08): : 9 - 16
  • [8] Editorial overview: Delving into organizational principles of plant genomes
    Saze, Hidetoshi
    Springer, Nathan
    CURRENT OPINION IN PLANT BIOLOGY, 2023, 76
  • [9] Rational analyses of organelle trajectories in tobacco pollen tubes reveal characteristics of the actomyosin cytoskeleton
    de Win, AHN
    Pierson, ES
    Derksen, J
    BIOPHYSICAL JOURNAL, 1999, 76 (03) : 1648 - 1658
  • [10] Metabolomics and WGCNA Analyses Reveal the Underlying Mechanisms of Resistance to Botrytis cinerea in Hazelnut
    Sun, Jun
    Lu, Liyuan
    Liu, Juanjuan
    Cui, Yanhong
    Liu, Hanqi
    Zhang, Yue
    Zheng, Zeyang
    Yang, Weicong
    GENES, 2025, 16 (01)