Complete chloroplast genome sequence ofChimonanthus praecoxlink (Calycanthaceae): an endemic plant species in China

被引：2
|
作者：
Zhou, Guang-Can [1 ]
Wang, Jie-Yu [2 ]
Li, Wen [1 ]
Zhang, Ming [1 ]
Meng, Guo-Qing [1 ]
Wang, Heng-Yi [1 ]
Chen, Xiao [1 ]
Wu, Yu-Han [1 ]
Wu, Ping [3 ]
Wang, Yi-Lei [1 ]
机构：
[1] Heze Univ, Coll Agr & Biol Engn, Coll Tree Peony, Heze, Peoples R China
[2] Chinese Acad Sci, Key Lab Plant Resources Conservat & Sustainable U, South China Bot Garden, Guangzhou, Peoples R China
[3] Chinese Acad Sci, Shanghai Adv Res Inst, Natl Facil Prot Sci Shanghai, Shanghai, Peoples R China
来源：
MITOCHONDRIAL DNA PART B-RESOURCES | 2020年 / 5卷 / 03期
关键词：
Chimonanthus praecox; complete chloroplast genome; Illumina sequencing; Calycanthaceae; phylogeny; CHIMONANTHUS-PRAECOX; CONSTITUENTS;
D O I：
10.1080/23802359.2020.1823277
中图分类号：
Q3 [遗传学];
学科分类号：
071007 ; 090102 ;
摘要：
Chimonanthus praecox, a deciduous shrub tree, is endemic to China and widely cultivated in the world as a popular garden and ornamental plant. Here, we have reported its complete chloroplast genome with a length of 153,181 bp, containing a large single copy (LSC) region of 86,916 bp, a small single copy (SSC) region of 19,767 bp and two identical inverted repeat regions (IRs) of 23,249 bp. The overall GC contents of the plastome were 39.27%. A total of 114 unique genes were successfully annotated consisting of 80 protein-coding genes, 30 tRNA genes and four rRNA genes. Sixteen genes each possessed one intron and three genes had two introns. The ML phylogenetic analysis supportsChimonanthusas sister toCalycanthus. This result will be helpful for genetic breeding and population genetics ofC. praecox, DNA barcoding ofChimonanthus, and phylogenetic studies of Calycanthaceae.
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收藏
页码：3487 / 3489
页数：3
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