Plant pathogen culture collections:: It takes a village to preserve these resources vital to the advancement of agricultural security and plant pathology

被引:23
|
作者
Kang, Seogchan [1 ]
Blair, Jaime E.
Geiser, David M.
Khang, Chang-Hyun
Park, Sook-Young
Gahegan, Mark
O'Donnell, Kerry
Luster, Douglas G.
Kim, Seong H.
Ivors, Kelly L.
Lee, Yong-Hwan
Lee, Yin-Won
Grunwald, Niklaus J.
Martin, Frank M.
Coffey, Michael D.
Veeraraghavan, Narayanan
Makalowska, Izabela
机构
[1] Penn State Univ, Dept Plant Pathol, University Pk, PA 16802 USA
[2] Penn State Univ, Dept Geog, University Pk, PA 16802 USA
[3] USDA ARS, Microbial Genom Res Unit, Peoria, IL 61604 USA
[4] USDA ARS, Foreign Dis Weed Sci Res Unit, Ft Detrick, MD 21702 USA
[5] Penn Dept Agr, Harrisburg, PA 17110 USA
[6] N Carolina State Univ, Mt Hort Crops Res & Extens Ctr, Fletcher, NC 28732 USA
[7] Seoul Natl Univ, Sch Agr Biotechnol, Seoul, South Korea
[8] Oregon State Univ, USDA ARS, Hort Crops Res Lab, Corvallis, OR 97330 USA
[9] Oregon State Univ, Dept Bot & Plant Pathol, Corvallis, OR 97330 USA
[10] Univ Calif Riverside, Dept Plant Pathol, Riverside, CA 92521 USA
[11] Penn State Univ, Huck Inst Life Sci, Ctr Computat Genom, University Pk, PA 16802 USA
关键词
database; disease diagnosis; epidemiology; informatics; pathogen taxonomy and systematics; population genetics;
D O I
10.1094/PHYTO-96-0920
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
Plant pathogen culture collections are essential resources in our fight against plant disease and for connecting discoveries of the present with established knowledge of the past. However, available infrastructure in support of culture collections is in serious need of improvement, and we continually face the risk of losing many of these collections. As novel and reemerging plant pathogens threaten agriculture, their timely identification and monitoring depends on rapid access to cultures representing the known diversity of plant pathogens along with genotypic, phenotypic, and epidemiological data associated with them. Archiving such data in a format that can be easily accessed and searched is essential for rapid assessment of potential risk and can help track the change and movement of pathogens. The underexplored pathogen diversity in nature further underscores the importance of cataloguing pathogen cultures. Realizing the potential of pathogen genomics as a foundation for developing effective disease control also hinges on how effectively we use the sequenced isolate as a reference to understand the genetic and phenotypic diversity within a pathogen species. In this letter, we propose a number of measures for improving pathogen culture collections.
引用
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页码:920 / 925
页数:6
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